Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
THBS1P07996 KRT8P43-201ENST00000406052 1458 ntBASIC12.89□□□□□ -0.35
THBS1P07996 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.89□□□□□ -0.35
THBS1P07996 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
THBS1P07996 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.88□□□□□ -0.35
THBS1P07996 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
THBS1P07996 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
THBS1P07996 MIR497HG-202ENST00000572453 3838 ntBASIC12.88□□□□□ -0.35
THBS1P07996 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
THBS1P07996 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.88□□□□□ -0.35
THBS1P07996 LINC00638-201ENST00000555578 2518 ntBASIC12.88□□□□□ -0.35
THBS1P07996 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.88□□□□□ -0.35
THBS1P07996 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 SLC25A24P2-201ENST00000415059 510 ntBASIC12.88□□□□□ -0.35
THBS1P07996 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.88□□□□□ -0.35
THBS1P07996 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.88□□□□□ -0.35
THBS1P07996 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC12.88□□□□□ -0.35
THBS1P07996 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.88□□□□□ -0.35
THBS1P07996 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.88□□□□□ -0.35
THBS1P07996 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.88□□□□□ -0.35
THBS1P07996 ACTG1P17-201ENST00000558391 1119 ntBASIC12.88□□□□□ -0.35
THBS1P07996 NDUFB10P1-201ENST00000567319 521 ntBASIC12.88□□□□□ -0.35
THBS1P07996 AC138649.2-201ENST00000615886 705 ntBASIC12.88□□□□□ -0.35
THBS1P07996 AL391262.2-201ENST00000622466 494 ntBASIC12.88□□□□□ -0.35
THBS1P07996 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 AC100757.4-201ENST00000626934 759 ntBASIC12.88□□□□□ -0.35
THBS1P07996 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.88□□□□□ -0.35
THBS1P07996 AL805961.1-203ENST00000641078 1258 ntBASIC12.88□□□□□ -0.35
THBS1P07996 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.88□□□□□ -0.35
THBS1P07996 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.88□□□□□ -0.35
THBS1P07996 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.88□□□□□ -0.35
THBS1P07996 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.88□□□□□ -0.35
THBS1P07996 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
THBS1P07996 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.88□□□□□ -0.35
THBS1P07996 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
THBS1P07996 FRMPD2B-201ENST00000431305 1347 ntBASIC12.88□□□□□ -0.35
THBS1P07996 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 MEX3B-202ENST00000558133 4333 ntBASIC12.87□□□□□ -0.35
THBS1P07996 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.87□□□□□ -0.35
THBS1P07996 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
THBS1P07996 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
THBS1P07996 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms