Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TPM3P06753 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.69■□□□□ 0.1
TPM3P06753 AL358472.3-201ENST00000608147 415 ntBASIC15.69■□□□□ 0.1
TPM3P06753 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TPM3P06753 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TPM3P06753 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TPM3P06753 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TPM3P06753 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TPM3P06753 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.68■□□□□ 0.1
TPM3P06753 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TPM3P06753 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
TPM3P06753 AC112492.5-201ENST00000421897 457 ntBASIC15.68■□□□□ 0.1
TPM3P06753 ST13P19-201ENST00000442505 1124 ntBASIC15.68■□□□□ 0.1
TPM3P06753 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TPM3P06753 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.68■□□□□ 0.1
TPM3P06753 COX5BP1-201ENST00000507622 393 ntBASIC15.68■□□□□ 0.1
TPM3P06753 AC106760.1-201ENST00000508690 800 ntBASIC15.68■□□□□ 0.1
TPM3P06753 AP003171.2-201ENST00000528208 925 ntBASIC15.68■□□□□ 0.1
TPM3P06753 AL136301.1-201ENST00000615830 422 ntBASIC15.68■□□□□ 0.1
TPM3P06753 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TPM3P06753 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.68■□□□□ 0.1
TPM3P06753 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TPM3P06753 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 TMBIM7P-202ENST00000641474 1516 ntBASIC15.68■□□□□ 0.1
TPM3P06753 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.68■□□□□ 0.1
TPM3P06753 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TPM3P06753 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TPM3P06753 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM3P06753 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM3P06753 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM3P06753 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.67■□□□□ 0.1
TPM3P06753 RBM8B-201ENST00000555532 525 ntBASIC15.67■□□□□ 0.1
TPM3P06753 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TPM3P06753 AC140658.4-201ENST00000561990 352 ntBASIC15.67■□□□□ 0.1
TPM3P06753 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.67■□□□□ 0.1
TPM3P06753 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM3P06753 ZACNP1-201ENST00000612259 710 ntBASIC15.67■□□□□ 0.1
TPM3P06753 AC090386.2-201ENST00000623010 1039 ntBASIC15.67■□□□□ 0.1
TPM3P06753 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.67■□□□□ 0.1
TPM3P06753 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM3P06753 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms