Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
APOA1P02647 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.48□□□□□ -0.41
APOA1P02647 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOA1P02647 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOA1P02647 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
APOA1P02647 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
APOA1P02647 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOA1P02647 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOA1P02647 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.47□□□□□ -0.41
APOA1P02647 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.47□□□□□ -0.41
APOA1P02647 FO681548.1-201ENST00000455617 1132 ntBASIC12.47□□□□□ -0.41
APOA1P02647 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 AC069262.1-201ENST00000539058 672 ntBASIC12.47□□□□□ -0.41
APOA1P02647 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.47□□□□□ -0.41
APOA1P02647 SPDYE22P-201ENST00000582158 798 ntBASIC12.47□□□□□ -0.41
APOA1P02647 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.47□□□□□ -0.41
APOA1P02647 AC073592.8-201ENST00000624126 511 ntBASIC12.47□□□□□ -0.41
APOA1P02647 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.47□□□□□ -0.41
APOA1P02647 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOA1P02647 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.47□□□□□ -0.41
APOA1P02647 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOA1P02647 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
APOA1P02647 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.46□□□□□ -0.41
APOA1P02647 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.46□□□□□ -0.41
APOA1P02647 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
APOA1P02647 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC12.46□□□□□ -0.41
APOA1P02647 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.46□□□□□ -0.41
APOA1P02647 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.46□□□□□ -0.41
APOA1P02647 PUDPP3-201ENST00000445368 636 ntBASIC12.46□□□□□ -0.41
APOA1P02647 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.46□□□□□ -0.41
APOA1P02647 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.46□□□□□ -0.41
APOA1P02647 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.46□□□□□ -0.41
APOA1P02647 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 AL844908.2-201ENST00000609461 460 ntBASIC12.46□□□□□ -0.41
APOA1P02647 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
APOA1P02647 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOA1P02647 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.46□□□□□ -0.42
APOA1P02647 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOA1P02647 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms