RNA–Protein interactions for RNA: ENST00000362065.8

FAN1-201, Transcript of FANCD2 and FANCI associated nuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAN1, Length 4,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAN1-201ENST00000362065 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
FAN1-201ENST00000362065 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
FAN1-201ENST00000362065 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
FAN1-201ENST00000362065 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.83
FAN1-201ENST00000362065 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
FAN1-201ENST00000362065 FAM9AQ8IZU1 332 aaPredicted RBP19.28■□□□□ 0.68
FAN1-201ENST00000362065 APLP2Q06481 763 aa19.26■□□□□ 0.67
FAN1-201ENST00000362065 PCGF6Q9BYE7 350 aa19.2■□□□□ 0.66
FAN1-201ENST00000362065 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.65
FAN1-201ENST00000362065 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
FAN1-201ENST00000362065 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
FAN1-201ENST00000362065 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
FAN1-201ENST00000362065 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
FAN1-201ENST00000362065 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
FAN1-201ENST00000362065 HRCP23327 699 aa18.76■□□□□ 0.59
FAN1-201ENST00000362065 UBTFP17480 764 aaKnown RBP18.73■□□□□ 0.59
FAN1-201ENST00000362065 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
FAN1-201ENST00000362065 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
FAN1-201ENST00000362065 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
FAN1-201ENST00000362065 ATP1B4Q9UN42 357 aaPredicted RBP18.6■□□□□ 0.57
FAN1-201ENST00000362065 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
FAN1-201ENST00000362065 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
FAN1-201ENST00000362065 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
FAN1-201ENST00000362065 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
FAN1-201ENST00000362065 ABCC9O60706 1549 aa18.19■□□□□ 0.5
FAN1-201ENST00000362065 MYT1Q01538 1121 aa18.09■□□□□ 0.49
FAN1-201ENST00000362065 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
FAN1-201ENST00000362065 YTHDC1Q96MU7 727 aaKnown RBP18.05■□□□□ 0.48
FAN1-201ENST00000362065 ITGAEP38570 1179 aa18.04■□□□□ 0.48
FAN1-201ENST00000362065 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
FAN1-201ENST00000362065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
FAN1-201ENST00000362065 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
FAN1-201ENST00000362065 NEFLP07196 543 aa17.96■□□□□ 0.47
FAN1-201ENST00000362065 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
FAN1-201ENST00000362065 DIEXFQ68CQ4 756 aaKnown RBP17.85■□□□□ 0.45
FAN1-201ENST00000362065 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
FAN1-201ENST00000362065 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
FAN1-201ENST00000362065 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.43
FAN1-201ENST00000362065 POLR3GLQ9BT43 218 aa17.71■□□□□ 0.43
FAN1-201ENST00000362065 FAM50AQ14320 339 aaKnown RBP17.65■□□□□ 0.42
FAN1-201ENST00000362065 MYO15BQ96JP2 1530 aa17.64■□□□□ 0.42
FAN1-201ENST00000362065 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
FAN1-201ENST00000362065 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
FAN1-201ENST00000362065 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
FAN1-201ENST00000362065 TRIM52Q96A61 297 aa17.5■□□□□ 0.39
FAN1-201ENST00000362065 NACADO15069 1562 aa17.49■□□□□ 0.39
FAN1-201ENST00000362065 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
FAN1-201ENST00000362065 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
FAN1-201ENST00000362065 EEA1Q15075 1411 aa17.45■□□□□ 0.38
FAN1-201ENST00000362065 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
FAN1-201ENST00000362065 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
FAN1-201ENST00000362065 FBLN2P98095 1184 aa17.41■□□□□ 0.38
FAN1-201ENST00000362065 P3H3Q8IVL6 736 aa17.36■□□□□ 0.37
FAN1-201ENST00000362065 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
FAN1-201ENST00000362065 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
FAN1-201ENST00000362065 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
FAN1-201ENST00000362065 ANP32CO43423 234 aa17.26■□□□□ 0.35
FAN1-201ENST00000362065 GOLGA3Q08378 1498 aa17.25■□□□□ 0.35
FAN1-201ENST00000362065 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
FAN1-201ENST00000362065 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
FAN1-201ENST00000362065 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
FAN1-201ENST00000362065 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
FAN1-201ENST00000362065 CLIP1P30622 1438 aa17.22■□□□□ 0.35
FAN1-201ENST00000362065 TNIKQ9UKE5 1360 aa17.22■□□□□ 0.35
FAN1-201ENST00000362065 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
FAN1-201ENST00000362065 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
FAN1-201ENST00000362065 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
FAN1-201ENST00000362065 ZNF777Q9ULD5 760 aaPredicted RBP17.11■□□□□ 0.33
FAN1-201ENST00000362065 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
FAN1-201ENST00000362065 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
FAN1-201ENST00000362065 BCANQ96GW7 911 aa17.02■□□□□ 0.32
FAN1-201ENST00000362065 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
FAN1-201ENST00000362065 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
FAN1-201ENST00000362065 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
FAN1-201ENST00000362065 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
FAN1-201ENST00000362065 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
FAN1-201ENST00000362065 MIER1Q8N108 512 aa16.92■□□□□ 0.3
FAN1-201ENST00000362065 CCDC88BA6NC98 1476 aa16.87■□□□□ 0.29
FAN1-201ENST00000362065 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
FAN1-201ENST00000362065 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
FAN1-201ENST00000362065 SOGA1O94964 1423 aa16.85■□□□□ 0.29
FAN1-201ENST00000362065 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
FAN1-201ENST00000362065 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
FAN1-201ENST00000362065 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
FAN1-201ENST00000362065 FKBP8Q14318 412 aa16.81■□□□□ 0.28
FAN1-201ENST00000362065 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
FAN1-201ENST00000362065 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
FAN1-201ENST00000362065 NEFMP07197 916 aa16.78■□□□□ 0.28
FAN1-201ENST00000362065 CANXP27824 592 aaKnown RBP16.78■□□□□ 0.28
FAN1-201ENST00000362065 WIZO95785 1651 aa16.77■□□□□ 0.27
FAN1-201ENST00000362065 TSPY4P0CV99 314 aa16.76■□□□□ 0.27
FAN1-201ENST00000362065 TSPY10P0CW01 314 aa16.76■□□□□ 0.27
FAN1-201ENST00000362065 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
FAN1-201ENST00000362065 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
FAN1-201ENST00000362065 HNRNPUQ00839 825 aaKnown RBP eCLIP16.75■□□□□ 0.27
FAN1-201ENST00000362065 CHGAP10645 457 aaKnown RBP16.74■□□□□ 0.27
FAN1-201ENST00000362065 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
FAN1-201ENST00000362065 ESF1Q9H501 851 aaKnown RBP16.72■□□□□ 0.27
FAN1-201ENST00000362065 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
FAN1-201ENST00000362065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.279e-7■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms