Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 RN7SL67P-201ENST00000492147 296 ntBASIC14.79□□□□□ -0.04
CD248Q9HCU0 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 AC003686.1-201ENST00000550956 1034 ntBASIC14.79□□□□□ -0.04
CD248Q9HCU0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 PHBP15-201ENST00000574228 665 ntBASIC14.79□□□□□ -0.04
CD248Q9HCU0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 MIR3677-201ENST00000578964 60 ntBASIC14.79□□□□□ -0.04
CD248Q9HCU0 AC007718.1-201ENST00000621078 280 ntBASIC14.79□□□□□ -0.04
CD248Q9HCU0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.79□□□□□ -0.04
CD248Q9HCU0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CD248Q9HCU0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AP000437.1-201ENST00000624057 2085 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 KRT8P28-201ENST00000433288 1390 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AC104784.1-201ENST00000473096 294 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AP003419.4-201ENST00000616071 517 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AL022323.5-201ENST00000624101 2059 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD248Q9HCU0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AC018629.1-201ENST00000623381 1736 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.78□□□□□ -0.04
CD248Q9HCU0 AL031719.1-201ENST00000623365 2587 ntBASIC14.78□□□□□ -0.04
CD248Q9HCU0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 AC012617.1-204ENST00000586340 2305 ntBASIC14.77□□□□□ -0.04
CD248Q9HCU0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 AC022497.1-201ENST00000624916 3691 ntBASIC14.77□□□□□ -0.04
CD248Q9HCU0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.77□□□□□ -0.04
CD248Q9HCU0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD248Q9HCU0 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms