Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 KRT8P21-201ENST00000430398 1491 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 MPRIPP1-201ENST00000452433 1089 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 ZNF767P-206ENST00000513792 565 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 AL008638.5-201ENST00000623814 1298 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 MARK2P16-201ENST00000605714 1723 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPF3BQ9BZI7 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 AC136604.1-202ENST00000425471 771 ntBASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 RN7SL530P-201ENST00000485097 298 ntBASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 AC005740.1-201ENST00000515639 522 ntBASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 AP003969.2-201ENST00000623739 2275 ntBASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.68■□□□□ 0.26
UPF3BQ9BZI7 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AC104758.3-203ENST00000562938 2123 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 DMBT1P1-203ENST00000636837 4628 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 Z98885.3-201ENST00000624882 1757 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms