Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 PDXDC2P-206ENST00000534700 1315 ntBASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CTC1Q2NKJ3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC090505.1-201ENST00000430515 1834 ntBASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC106827.1-201ENST00000366454 431 ntBASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC092573.1-201ENST00000433054 884 ntBASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC087203.1-201ENST00000532111 1181 ntBASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC011462.4-201ENST00000616866 449 ntBASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 KRT8P18-201ENST00000413425 1445 ntBASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AC138761.6-201ENST00000583997 1423 ntBASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CTC1Q2NKJ3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 OR10N1P-201ENST00000392758 869 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 PGAM1P11-201ENST00000416729 680 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 BCL2L12P1-201ENST00000508390 733 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 AC005586.2-201ENST00000563946 837 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 AC005777.1-201ENST00000588332 187 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 AL136982.5-201ENST00000605222 294 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 AC015909.5-201ENST00000624336 2266 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms