Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN1P35523 RN7SL48P-201ENST00000579283 293 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 MIR3197-201ENST00000582241 73 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN1P35523 AC138466.3-201ENST00000619983 221 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CLCN1P35523 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN1P35523 MAX-212ENST00000555932 1673 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN1P35523 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 CICP19-201ENST00000632944 2357 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CLCN1P35523 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
CLCN1P35523 PEG13-201ENST00000631594 5667 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN1P35523 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN1P35523 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 AC005229.1-201ENST00000392885 409 ntBASIC15.93■□□□□ 0.14
CLCN1P35523 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN1P35523 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCN1P35523 AL391280.1-201ENST00000506969 1062 ntBASIC15.93■□□□□ 0.14
CLCN1P35523 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN1P35523 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCN1P35523 AC008735.3-201ENST00000596646 500 ntBASIC15.93■□□□□ 0.14
CLCN1P35523 IGHV3-72-202ENST00000621503 303 ntBASIC15.93■□□□□ 0.14
CLCN1P35523 AC132938.4-201ENST00000623835 848 ntBASIC15.93■□□□□ 0.14
CLCN1P35523 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN1P35523 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CLCN1P35523 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CLCN1P35523 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CLCN1P35523 SMCR5-201ENST00000543475 2844 ntBASIC15.92■□□□□ 0.14
CLCN1P35523 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CLCN1P35523 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.92■□□□□ 0.14
CLCN1P35523 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CLCN1P35523 GCOM2-201ENST00000509133 1104 ntBASIC15.92■□□□□ 0.14
CLCN1P35523 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC15.92■□□□□ 0.14
CLCN1P35523 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.92■□□□□ 0.14
CLCN1P35523 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCN1P35523 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCN1P35523 AC022726.2-201ENST00000634673 547 ntBASIC15.92■□□□□ 0.14
CLCN1P35523 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCN1P35523 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 PDIA3P1-201ENST00000471856 1510 ntBASIC15.92■□□□□ 0.14
CLCN1P35523 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCN1P35523 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCN1P35523 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CLCN1P35523 FKBP4P6-201ENST00000457486 1332 ntBASIC15.92■□□□□ 0.14
CLCN1P35523 MRPL37P1-201ENST00000592451 1337 ntBASIC15.92■□□□□ 0.14
CLCN1P35523 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCN1P35523 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN1P35523 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCN1P35523 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCN1P35523 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms