Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.21□□□□□ -0.13
NFKB1P19838 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NFKB1P19838 KLF17P1-201ENST00000547105 1126 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 AL161670.2-201ENST00000557650 1227 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.21□□□□□ -0.13
NFKB1P19838 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NFKB1P19838 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NFKB1P19838 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.21□□□□□ -0.13
NFKB1P19838 KRT8P31-201ENST00000504812 1408 ntBASIC14.21□□□□□ -0.13
NFKB1P19838 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NFKB1P19838 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
NFKB1P19838 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.21□□□□□ -0.14
NFKB1P19838 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.21□□□□□ -0.14
NFKB1P19838 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NFKB1P19838 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NFKB1P19838 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.21□□□□□ -0.14
NFKB1P19838 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.21□□□□□ -0.14
NFKB1P19838 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
NFKB1P19838 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
NFKB1P19838 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 KRT18P9-201ENST00000604826 1300 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NFKB1P19838 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 ZNF493-208ENST00000599461 1769 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NFKB1P19838 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.2□□□□□ -0.14
NFKB1P19838 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 Z97180.1-201ENST00000445173 988 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 AC005077.2-201ENST00000449786 690 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.2□□□□□ -0.14
NFKB1P19838 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NFKB1P19838 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.2□□□□□ -0.14
NFKB1P19838 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.2□□□□□ -0.14
NFKB1P19838 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 MIR6799-201ENST00000620297 69 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 TBC1D27-202ENST00000424239 1573 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 AL358781.1-202ENST00000321081 1360 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.2□□□□□ -0.14
NFKB1P19838 AC004241.5-201ENST00000623870 2448 ntBASIC14.2□□□□□ -0.14
NFKB1P19838 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NFKB1P19838 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NFKB1P19838 PCDHA6-201ENST00000378126 3267 ntBASIC14.19□□□□□ -0.14
NFKB1P19838 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.19□□□□□ -0.14
NFKB1P19838 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.19□□□□□ -0.14
NFKB1P19838 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NFKB1P19838 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NFKB1P19838 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.19□□□□□ -0.14
NFKB1P19838 AC107918.4-201ENST00000641966 3141 ntBASIC14.19□□□□□ -0.14
NFKB1P19838 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms