Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PIN4P1-201ENST00000451079 396 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.02□□□□□ -0.17
SMAD6O43541 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.02□□□□□ -0.17
SMAD6O43541 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.02□□□□□ -0.17
SMAD6O43541 AC093826.1-201ENST00000508655 993 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.02□□□□□ -0.17
SMAD6O43541 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.02□□□□□ -0.17
SMAD6O43541 MIR3940-201ENST00000579148 102 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 RN7SL556P-201ENST00000582856 298 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 MIR4750-201ENST00000584564 56 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.02□□□□□ -0.17
SMAD6O43541 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.02□□□□□ -0.17
SMAD6O43541 AL118522.1-201ENST00000611368 560 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 AL132780.4-201ENST00000624870 1135 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 SNORA50.1-201ENST00000628590 135 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
SMAD6O43541 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.02□□□□□ -0.17
SMAD6O43541 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SMAD6O43541 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMAD6O43541 AC130686.1-201ENST00000622936 2466 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.02□□□□□ -0.17
SMAD6O43541 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMAD6O43541 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMAD6O43541 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMAD6O43541 AC245140.2-201ENST00000624054 1939 ntBASIC14.02□□□□□ -0.17
SMAD6O43541 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.01□□□□□ -0.17
SMAD6O43541 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 AC021305.1-201ENST00000520656 1514 ntBASIC14.01□□□□□ -0.17
SMAD6O43541 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SMAD6O43541 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 ACTG1P19-201ENST00000418987 1116 ntBASIC14.01□□□□□ -0.17
SMAD6O43541 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 KRT18P62-201ENST00000446618 1287 ntBASIC14.01□□□□□ -0.17
SMAD6O43541 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 RN7SL23P-201ENST00000484055 275 ntBASIC14.01□□□□□ -0.17
SMAD6O43541 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.01□□□□□ -0.17
SMAD6O43541 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.01□□□□□ -0.17
SMAD6O43541 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 AL365181.1-201ENST00000564032 1828 ntBASIC14.01□□□□□ -0.17
SMAD6O43541 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SMAD6O43541 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.01□□□□□ -0.17
SMAD6O43541 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMAD6O43541 CR383656.2-201ENST00000548656 2254 ntBASIC14.01□□□□□ -0.17
SMAD6O43541 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14□□□□□ -0.17
SMAD6O43541 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14□□□□□ -0.17
SMAD6O43541 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14□□□□□ -0.17
SMAD6O43541 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMAD6O43541 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms