Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 SUDS3P1-201ENST00000505831 966 ntBASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 AC135279.3-201ENST00000610945 1311 ntBASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA4Q9Y5G9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 AC004812.2-201ENST00000611079 2094 ntBASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA4Q9Y5G9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 MIR6722-201ENST00000617286 78 ntBASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGA4Q9Y5G9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA4Q9Y5G9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 AC104564.3-201ENST00000582367 638 ntBASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 MIR5787-201ENST00000611784 55 ntBASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA4Q9Y5G9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 EDA-201ENST00000338901 1233 ntBASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA4Q9Y5G9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
PCDHGA4Q9Y5G9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGA4Q9Y5G9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA4Q9Y5G9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 AC024257.2-201ENST00000549699 147 ntBASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 AL355001.2-201ENST00000620617 1191 ntBASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA4Q9Y5G9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
PCDHGA4Q9Y5G9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA4Q9Y5G9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA4Q9Y5G9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGA4Q9Y5G9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms