Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZSWIM4Q9H7M6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
ZSWIM4Q9H7M6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.3■■□□□ 1.64
ZSWIM4Q9H7M6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
ZSWIM4Q9H7M6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ZSWIM4Q9H7M6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZSWIM4Q9H7M6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZSWIM4Q9H7M6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
ZSWIM4Q9H7M6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.28■■□□□ 1.64
ZSWIM4Q9H7M6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.28■■□□□ 1.64
ZSWIM4Q9H7M6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 SRD5A1P1-201ENST00000442297 786 ntBASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZSWIM4Q9H7M6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 C17orf82-201ENST00000623772 1530 ntBASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZSWIM4Q9H7M6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZSWIM4Q9H7M6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
ZSWIM4Q9H7M6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.24■■□□□ 1.63
ZSWIM4Q9H7M6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.23■■□□□ 1.63
ZSWIM4Q9H7M6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZSWIM4Q9H7M6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZSWIM4Q9H7M6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
ZSWIM4Q9H7M6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.22■■□□□ 1.63
ZSWIM4Q9H7M6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.22■■□□□ 1.63
ZSWIM4Q9H7M6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZSWIM4Q9H7M6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZSWIM4Q9H7M6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZSWIM4Q9H7M6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
ZSWIM4Q9H7M6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.2■■□□□ 1.62
ZSWIM4Q9H7M6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.2■■□□□ 1.62
ZSWIM4Q9H7M6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZSWIM4Q9H7M6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZSWIM4Q9H7M6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZSWIM4Q9H7M6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZSWIM4Q9H7M6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.2■■□□□ 1.62
ZSWIM4Q9H7M6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.19■■□□□ 1.62
ZSWIM4Q9H7M6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 393.4 ms