Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PPP1R3EQ9H7J1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PPP1R3EQ9H7J1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPP1R3EQ9H7J1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.83■□□□□ 0.76
PPP1R3EQ9H7J1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PPP1R3EQ9H7J1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 KRT8P33-201ENST00000508125 1423 ntBASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.82■□□□□ 0.76
PPP1R3EQ9H7J1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 AC242852.2-201ENST00000615738 1807 ntBASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 AC103834.1-201ENST00000520383 144 ntBASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 AC120024.1-201ENST00000562672 995 ntBASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPP1R3EQ9H7J1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.8■□□□□ 0.76
PPP1R3EQ9H7J1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PPP1R3EQ9H7J1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
PPP1R3EQ9H7J1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPP1R3EQ9H7J1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PPP1R3EQ9H7J1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PPP1R3EQ9H7J1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PPP1R3EQ9H7J1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP1R3EQ9H7J1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP1R3EQ9H7J1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPP1R3EQ9H7J1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP1R3EQ9H7J1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPP1R3EQ9H7J1 AC074183.2-201ENST00000623112 922 ntBASIC19.79■□□□□ 0.76
PPP1R3EQ9H7J1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PPP1R3EQ9H7J1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.77■□□□□ 0.76
PPP1R3EQ9H7J1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PPP1R3EQ9H7J1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PPP1R3EQ9H7J1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 AC022616.5-201ENST00000518796 181 ntBASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PPP1R3EQ9H7J1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 AC011551.1-201ENST00000614101 683 ntBASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PPP1R3EQ9H7J1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PPP1R3EQ9H7J1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.73■□□□□ 0.75
PPP1R3EQ9H7J1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms