Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDND2Q8NHS1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 ZNRF2P3-201ENST00000424200 374 ntBASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDND2Q8NHS1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDND2Q8NHS1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDND2Q8NHS1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDND2Q8NHS1 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.94■□□□□ 0.62
CLDND2Q8NHS1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDND2Q8NHS1 DUSP8P5-201ENST00000422884 1815 ntBASIC18.94■□□□□ 0.62
CLDND2Q8NHS1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDND2Q8NHS1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 SERBP1P1-201ENST00000396021 1160 ntBASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDND2Q8NHS1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 C17orf82-201ENST00000623772 1530 ntBASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 AF213884.3-201ENST00000563833 479 ntBASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDND2Q8NHS1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 MIR4767-201ENST00000582827 78 ntBASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDND2Q8NHS1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 AP001330.3-201ENST00000520123 633 ntBASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms