Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 RARRES2P1-201ENST00000474487 481 ntBASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 AC092028.1-203ENST00000608262 953 ntBASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 AC005703.6-201ENST00000623265 1329 ntBASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSMEM1Q8N8F7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSMEM1Q8N8F7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 KRT125P-201ENST00000546827 989 ntBASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.48■□□□□ 0.87
LSMEM1Q8N8F7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LSMEM1Q8N8F7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 AL353803.4-201ENST00000565882 1934 ntBASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.46■□□□□ 0.87
LSMEM1Q8N8F7 AC144652.1-201ENST00000609974 1624 ntBASIC20.45■□□□□ 0.87
LSMEM1Q8N8F7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LSMEM1Q8N8F7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.44■□□□□ 0.86
LSMEM1Q8N8F7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 MIR4787-201ENST00000607364 84 ntBASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LSMEM1Q8N8F7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 C1orf229-201ENST00000623686 2258 ntBASIC20.42■□□□□ 0.86
LSMEM1Q8N8F7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms