Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 LINC01124-201ENST00000409786 2117 ntBASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.28■■□□□ 1.64
NFRKBQ6P4R8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.27■■□□□ 1.64
NFRKBQ6P4R8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
NFRKBQ6P4R8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.26■■□□□ 1.63
NFRKBQ6P4R8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NFRKBQ6P4R8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.26■■□□□ 1.63
NFRKBQ6P4R8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NFRKBQ6P4R8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
NFRKBQ6P4R8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NFRKBQ6P4R8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NFRKBQ6P4R8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NFRKBQ6P4R8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NFRKBQ6P4R8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.23■■□□□ 1.63
NFRKBQ6P4R8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.23■■□□□ 1.63
NFRKBQ6P4R8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NFRKBQ6P4R8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NFRKBQ6P4R8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
NFRKBQ6P4R8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.22■■□□□ 1.63
NFRKBQ6P4R8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.22■■□□□ 1.63
NFRKBQ6P4R8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.22■■□□□ 1.63
NFRKBQ6P4R8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.22■■□□□ 1.63
NFRKBQ6P4R8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NFRKBQ6P4R8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NFRKBQ6P4R8 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.2■■□□□ 1.63
NFRKBQ6P4R8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NFRKBQ6P4R8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NFRKBQ6P4R8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NFRKBQ6P4R8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.2■■□□□ 1.62
NFRKBQ6P4R8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.19■■□□□ 1.62
NFRKBQ6P4R8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NFRKBQ6P4R8 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.19■■□□□ 1.62
NFRKBQ6P4R8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.19■■□□□ 1.62
NFRKBQ6P4R8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.19■■□□□ 1.62
NFRKBQ6P4R8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 AP003733.4-201ENST00000623785 1697 ntBASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
NFRKBQ6P4R8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms