Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PTCRAQ6ISU1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.45■■□□□ 1.34
PTCRAQ6ISU1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 AP004607.4-201ENST00000530158 1459 ntBASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PTCRAQ6ISU1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 AC004854.2-201ENST00000608450 1441 ntBASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 OR2I1P-207ENST00000453522 948 ntBASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 AC010501.1-201ENST00000606270 1962 ntBASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTCRAQ6ISU1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PTCRAQ6ISU1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PTCRAQ6ISU1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 AC142086.2-201ENST00000569753 217 ntBASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 AC011767.1-201ENST00000617410 1153 ntBASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PTCRAQ6ISU1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.39■■□□□ 1.34
PTCRAQ6ISU1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.39■■□□□ 1.34
PTCRAQ6ISU1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
PTCRAQ6ISU1 KRT18P6-201ENST00000555540 1265 ntBASIC23.39■■□□□ 1.33
PTCRAQ6ISU1 DUX4L4-201ENST00000566884 1269 ntBASIC23.39■■□□□ 1.33
PTCRAQ6ISU1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PTCRAQ6ISU1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PTCRAQ6ISU1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PTCRAQ6ISU1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PTCRAQ6ISU1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
PTCRAQ6ISU1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 KRT19P1-201ENST00000405746 1186 ntBASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.38■■□□□ 1.33
PTCRAQ6ISU1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PTCRAQ6ISU1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.37■■□□□ 1.33
PTCRAQ6ISU1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.37■■□□□ 1.33
PTCRAQ6ISU1 AC093827.2-201ENST00000512654 315 ntBASIC23.37■■□□□ 1.33
PTCRAQ6ISU1 TPRG1LP1-201ENST00000598702 760 ntBASIC23.37■■□□□ 1.33
PTCRAQ6ISU1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCRAQ6ISU1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms