Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDX1P52945 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.74■■□□□ 1.07
PDX1P52945 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.74■■□□□ 1.07
PDX1P52945 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDX1P52945 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PDX1P52945 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDX1P52945 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PDX1P52945 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.73■■□□□ 1.07
PDX1P52945 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
PDX1P52945 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.73■■□□□ 1.07
PDX1P52945 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.73■■□□□ 1.07
PDX1P52945 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.73■■□□□ 1.07
PDX1P52945 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDX1P52945 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.73■■□□□ 1.07
PDX1P52945 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.72■■□□□ 1.07
PDX1P52945 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDX1P52945 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.72■■□□□ 1.07
PDX1P52945 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.72■■□□□ 1.07
PDX1P52945 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDX1P52945 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PDX1P52945 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDX1P52945 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDX1P52945 AL161729.1-201ENST00000604104 1402 ntBASIC21.72■■□□□ 1.07
PDX1P52945 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PDX1P52945 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.71■■□□□ 1.07
PDX1P52945 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.71■■□□□ 1.07
PDX1P52945 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDX1P52945 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PDX1P52945 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDX1P52945 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.7■■□□□ 1.06
PDX1P52945 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.7■■□□□ 1.06
PDX1P52945 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.7■■□□□ 1.06
PDX1P52945 pRNA.6-201ENST00000610482 90 ntBASIC21.7■■□□□ 1.06
PDX1P52945 pRNA.5-201ENST00000612139 90 ntBASIC21.7■■□□□ 1.06
PDX1P52945 pRNA.11-201ENST00000618423 90 ntBASIC21.7■■□□□ 1.06
PDX1P52945 pRNA.13-201ENST00000619112 90 ntBASIC21.7■■□□□ 1.06
PDX1P52945 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.7■■□□□ 1.06
PDX1P52945 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDX1P52945 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDX1P52945 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDX1P52945 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.7■■□□□ 1.06
PDX1P52945 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PDX1P52945 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.69■■□□□ 1.06
PDX1P52945 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDX1P52945 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PDX1P52945 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDX1P52945 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDX1P52945 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDX1P52945 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDX1P52945 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDX1P52945 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDX1P52945 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDX1P52945 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.68■■□□□ 1.06
PDX1P52945 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDX1P52945 LINC00543-201ENST00000567234 1845 ntBASIC21.68■■□□□ 1.06
PDX1P52945 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDX1P52945 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDX1P52945 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDX1P52945 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDX1P52945 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PDX1P52945 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDX1P52945 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDX1P52945 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PDX1P52945 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDX1P52945 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.67■■□□□ 1.06
PDX1P52945 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PDX1P52945 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.67■■□□□ 1.06
PDX1P52945 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.67■■□□□ 1.06
PDX1P52945 AL031602.1-201ENST00000633169 911 ntBASIC21.67■■□□□ 1.06
PDX1P52945 ALDH1A3-203ENST00000557963 1670 ntBASIC21.66■■□□□ 1.06
PDX1P52945 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDX1P52945 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
PDX1P52945 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.66■■□□□ 1.06
PDX1P52945 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDX1P52945 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDX1P52945 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.66■■□□□ 1.06
PDX1P52945 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.66■■□□□ 1.06
PDX1P52945 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.66■■□□□ 1.06
PDX1P52945 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.66■■□□□ 1.06
PDX1P52945 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDX1P52945 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDX1P52945 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.65■■□□□ 1.06
PDX1P52945 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms