Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AP004607.4-201ENST00000530158 1459 ntBASIC22.48■■□□□ 1.19
SP9P0CG40 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SP9P0CG40 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
SP9P0CG40 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.48■■□□□ 1.19
SP9P0CG40 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.48■■□□□ 1.19
SP9P0CG40 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.48■■□□□ 1.19
SP9P0CG40 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.48■■□□□ 1.19
SP9P0CG40 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SP9P0CG40 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
SP9P0CG40 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.47■■□□□ 1.19
SP9P0CG40 GPX1P1-201ENST00000388829 606 ntBASIC22.47■■□□□ 1.19
SP9P0CG40 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.47■■□□□ 1.19
SP9P0CG40 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.47■■□□□ 1.19
SP9P0CG40 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
SP9P0CG40 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SP9P0CG40 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SP9P0CG40 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SP9P0CG40 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SP9P0CG40 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SP9P0CG40 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.46■■□□□ 1.19
SP9P0CG40 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.46■■□□□ 1.19
SP9P0CG40 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.46■■□□□ 1.19
SP9P0CG40 MIR6089-201ENST00000616698 64 ntBASIC22.46■■□□□ 1.19
SP9P0CG40 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SP9P0CG40 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SP9P0CG40 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SP9P0CG40 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SP9P0CG40 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
SP9P0CG40 AC142086.6-201ENST00000621154 1765 ntBASIC22.45■■□□□ 1.19
SP9P0CG40 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SP9P0CG40 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SP9P0CG40 MIR663A-201ENST00000385250 93 ntBASIC22.45■■□□□ 1.18
SP9P0CG40 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SP9P0CG40 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.45■■□□□ 1.18
SP9P0CG40 AC004854.2-201ENST00000608450 1441 ntBASIC22.45■■□□□ 1.18
SP9P0CG40 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SP9P0CG40 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SP9P0CG40 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SP9P0CG40 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SP9P0CG40 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
SP9P0CG40 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SP9P0CG40 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SP9P0CG40 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.44■■□□□ 1.18
SP9P0CG40 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SP9P0CG40 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.44■■□□□ 1.18
SP9P0CG40 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.44■■□□□ 1.18
SP9P0CG40 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SP9P0CG40 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.44■■□□□ 1.18
SP9P0CG40 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.44■■□□□ 1.18
SP9P0CG40 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SP9P0CG40 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
SP9P0CG40 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SP9P0CG40 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SP9P0CG40 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SP9P0CG40 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SP9P0CG40 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SP9P0CG40 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.43■■□□□ 1.18
SP9P0CG40 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.43■■□□□ 1.18
SP9P0CG40 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
SP9P0CG40 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SP9P0CG40 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SP9P0CG40 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SP9P0CG40 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SP9P0CG40 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SP9P0CG40 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SP9P0CG40 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SP9P0CG40 TPRG1LP1-201ENST00000598702 760 ntBASIC22.42■■□□□ 1.18
SP9P0CG40 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.42■■□□□ 1.18
SP9P0CG40 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SP9P0CG40 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
SP9P0CG40 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SP9P0CG40 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SP9P0CG40 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.41■■□□□ 1.18
SP9P0CG40 DUX4L4-201ENST00000566884 1269 ntBASIC22.41■■□□□ 1.18
SP9P0CG40 AC142086.2-201ENST00000569753 217 ntBASIC22.41■■□□□ 1.18
SP9P0CG40 AC011767.1-201ENST00000617410 1153 ntBASIC22.41■■□□□ 1.18
SP9P0CG40 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.41■■□□□ 1.18
SP9P0CG40 SLC6A10P-202ENST00000431994 2058 ntBASIC22.41■■□□□ 1.18
SP9P0CG40 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.41■■□□□ 1.18
SP9P0CG40 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SP9P0CG40 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.41■■□□□ 1.18
SP9P0CG40 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SP9P0CG40 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SP9P0CG40 KRT19P1-201ENST00000405746 1186 ntBASIC22.4■■□□□ 1.18
SP9P0CG40 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SP9P0CG40 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SP9P0CG40 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SP9P0CG40 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SP9P0CG40 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.4■■□□□ 1.18
SP9P0CG40 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SP9P0CG40 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SP9P0CG40 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.4■■□□□ 1.18
SP9P0CG40 AL161729.1-201ENST00000604104 1402 ntBASIC22.4■■□□□ 1.18
SP9P0CG40 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SP9P0CG40 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
SP9P0CG40 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.39■■□□□ 1.17
SP9P0CG40 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SP9P0CG40 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.39■■□□□ 1.17
SP9P0CG40 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SP9P0CG40 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms