Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TNFSF11O14788 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
TNFSF11O14788 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 AC006455.2-201ENST00000429931 906 ntBASIC20.12■□□□□ 0.81
TNFSF11O14788 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFSF11O14788 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFSF11O14788 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.12■□□□□ 0.81
TNFSF11O14788 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TNFSF11O14788 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TNFSF11O14788 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF11O14788 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.12■□□□□ 0.81
TNFSF11O14788 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TNFSF11O14788 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF11O14788 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TNFSF11O14788 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF11O14788 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF11O14788 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF11O14788 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF11O14788 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF11O14788 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF11O14788 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF11O14788 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TNFSF11O14788 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFSF11O14788 SYT6-210ENST00000641643 1587 ntBASIC20.1■□□□□ 0.81
TNFSF11O14788 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF11O14788 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF11O14788 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF11O14788 DUX4L19-201ENST00000557448 1267 ntBASIC20.1■□□□□ 0.81
TNFSF11O14788 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TNFSF11O14788 ANOS2P-203ENST00000472227 1816 ntBASIC20.1■□□□□ 0.81
TNFSF11O14788 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TNFSF11O14788 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
TNFSF11O14788 UNC93B3-201ENST00000308076 687 ntBASIC20.09■□□□□ 0.81
TNFSF11O14788 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF11O14788 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF11O14788 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF11O14788 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF11O14788 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF11O14788 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.09■□□□□ 0.81
TNFSF11O14788 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TNFSF11O14788 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF11O14788 FP325331.1-202ENST00000623531 1380 ntBASIC20.08■□□□□ 0.81
TNFSF11O14788 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF11O14788 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF11O14788 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF11O14788 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF11O14788 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF11O14788 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.08■□□□□ 0.81
TNFSF11O14788 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF11O14788 AC110285.6-201ENST00000617652 491 ntBASIC20.08■□□□□ 0.81
TNFSF11O14788 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF11O14788 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF11O14788 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF11O14788 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF11O14788 LINC01529-204ENST00000636474 1715 ntBASIC20.07■□□□□ 0.8
TNFSF11O14788 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF11O14788 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF11O14788 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.07■□□□□ 0.8
TNFSF11O14788 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
TNFSF11O14788 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF11O14788 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TNFSF11O14788 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.07■□□□□ 0.8
TNFSF11O14788 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 SERBP1P1-201ENST00000396021 1160 ntBASIC20.06■□□□□ 0.8
TNFSF11O14788 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 AL139246.5-201ENST00000606645 996 ntBASIC20.06■□□□□ 0.8
TNFSF11O14788 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.06■□□□□ 0.8
TNFSF11O14788 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFSF11O14788 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.06■□□□□ 0.8
TNFSF11O14788 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
TNFSF11O14788 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF11O14788 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TNFSF11O14788 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFSF11O14788 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF11O14788 AL136162.1-201ENST00000607711 1078 ntBASIC20.05■□□□□ 0.8
TNFSF11O14788 pRNA.6-201ENST00000610482 90 ntBASIC20.05■□□□□ 0.8
TNFSF11O14788 pRNA.5-201ENST00000612139 90 ntBASIC20.05■□□□□ 0.8
TNFSF11O14788 pRNA.11-201ENST00000618423 90 ntBASIC20.05■□□□□ 0.8
TNFSF11O14788 pRNA.13-201ENST00000619112 90 ntBASIC20.05■□□□□ 0.8
TNFSF11O14788 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF11O14788 AL353803.4-201ENST00000565882 1934 ntBASIC20.05■□□□□ 0.8
TNFSF11O14788 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFSF11O14788 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TNFSF11O14788 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF11O14788 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms