Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 LINC01529-204ENST00000636474 1715 ntBASIC21.07■□□□□ 0.96
CLDN4O14493 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN4O14493 AC099791.2-201ENST00000605725 427 ntBASIC21.07■□□□□ 0.96
CLDN4O14493 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN4O14493 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLDN4O14493 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN4O14493 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN4O14493 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLDN4O14493 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN4O14493 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN4O14493 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLDN4O14493 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN4O14493 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN4O14493 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN4O14493 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN4O14493 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN4O14493 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.06■□□□□ 0.96
CLDN4O14493 AC079630.1-202ENST00000618127 1840 ntBASIC21.06■□□□□ 0.96
CLDN4O14493 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN4O14493 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN4O14493 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.05■□□□□ 0.96
CLDN4O14493 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.05■□□□□ 0.96
CLDN4O14493 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.05■□□□□ 0.96
CLDN4O14493 AC009086.3-201ENST00000623486 1008 ntBASIC21.05■□□□□ 0.96
CLDN4O14493 ANOS2P-203ENST00000472227 1816 ntBASIC21.05■□□□□ 0.96
CLDN4O14493 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.05■□□□□ 0.96
CLDN4O14493 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN4O14493 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN4O14493 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLDN4O14493 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN4O14493 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN4O14493 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN4O14493 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLDN4O14493 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN4O14493 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN4O14493 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN4O14493 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLDN4O14493 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLDN4O14493 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN4O14493 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLDN4O14493 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CLDN4O14493 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN4O14493 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLDN4O14493 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN4O14493 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CLDN4O14493 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN4O14493 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN4O14493 DUX4L4-201ENST00000566884 1269 ntBASIC21.03■□□□□ 0.96
CLDN4O14493 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN4O14493 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN4O14493 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN4O14493 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN4O14493 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN4O14493 SYT6-210ENST00000641643 1587 ntBASIC21.02■□□□□ 0.96
CLDN4O14493 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN4O14493 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN4O14493 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN4O14493 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN4O14493 AC092068.2-201ENST00000590491 1708 ntBASIC21.02■□□□□ 0.96
CLDN4O14493 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CLDN4O14493 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.02■□□□□ 0.96
CLDN4O14493 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN4O14493 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN4O14493 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN4O14493 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.02■□□□□ 0.96
CLDN4O14493 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CLDN4O14493 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN4O14493 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN4O14493 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN4O14493 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN4O14493 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN4O14493 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN4O14493 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN4O14493 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN4O14493 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN4O14493 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN4O14493 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN4O14493 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21■□□□□ 0.95
CLDN4O14493 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLDN4O14493 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN4O14493 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLDN4O14493 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21■□□□□ 0.95
CLDN4O14493 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21■□□□□ 0.95
CLDN4O14493 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLDN4O14493 SF1-220ENST00000626028 704 ntTSL 2 BASIC21■□□□□ 0.95
CLDN4O14493 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN4O14493 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN4O14493 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN4O14493 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21■□□□□ 0.95
CLDN4O14493 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLDN4O14493 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN4O14493 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN4O14493 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN4O14493 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN4O14493 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLDN4O14493 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN4O14493 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN4O14493 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN4O14493 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.99■□□□□ 0.95
CLDN4O14493 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms