Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.11■□□□□ 0.97
CLIC1O00299 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC1O00299 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLIC1O00299 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC1O00299 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC1O00299 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.1■□□□□ 0.97
CLIC1O00299 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC1O00299 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLIC1O00299 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLIC1O00299 AL353803.4-201ENST00000565882 1934 ntBASIC21.1■□□□□ 0.97
CLIC1O00299 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLIC1O00299 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC1O00299 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.09■□□□□ 0.97
CLIC1O00299 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.09■□□□□ 0.97
CLIC1O00299 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.09■□□□□ 0.97
CLIC1O00299 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC1O00299 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC1O00299 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLIC1O00299 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLIC1O00299 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC1O00299 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.09■□□□□ 0.97
CLIC1O00299 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.09■□□□□ 0.97
CLIC1O00299 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.09■□□□□ 0.97
CLIC1O00299 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.09■□□□□ 0.97
CLIC1O00299 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC1O00299 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
CLIC1O00299 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLIC1O00299 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.08■□□□□ 0.97
CLIC1O00299 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.08■□□□□ 0.97
CLIC1O00299 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC1O00299 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLIC1O00299 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CLIC1O00299 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.08■□□□□ 0.97
CLIC1O00299 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CLIC1O00299 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.08■□□□□ 0.97
CLIC1O00299 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.08■□□□□ 0.97
CLIC1O00299 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLIC1O00299 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLIC1O00299 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLIC1O00299 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC1O00299 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC1O00299 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CLIC1O00299 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIC1O00299 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CLIC1O00299 MIR4508-201ENST00000584178 70 ntBASIC21.07■□□□□ 0.96
CLIC1O00299 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC1O00299 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLIC1O00299 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLIC1O00299 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC1O00299 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC1O00299 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
CLIC1O00299 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC1O00299 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLIC1O00299 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLIC1O00299 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.06■□□□□ 0.96
CLIC1O00299 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC1O00299 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC1O00299 AC127496.7-201ENST00000625110 1798 ntBASIC21.06■□□□□ 0.96
CLIC1O00299 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.06■□□□□ 0.96
CLIC1O00299 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.06■□□□□ 0.96
CLIC1O00299 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC1O00299 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.06■□□□□ 0.96
CLIC1O00299 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLIC1O00299 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC1O00299 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLIC1O00299 AC242852.2-201ENST00000615738 1807 ntBASIC21.06■□□□□ 0.96
CLIC1O00299 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC1O00299 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC1O00299 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC1O00299 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC1O00299 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC1O00299 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.05■□□□□ 0.96
CLIC1O00299 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.05■□□□□ 0.96
CLIC1O00299 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLIC1O00299 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CLIC1O00299 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC1O00299 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLIC1O00299 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.04■□□□□ 0.96
CLIC1O00299 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLIC1O00299 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC1O00299 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLIC1O00299 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC1O00299 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.03■□□□□ 0.96
CLIC1O00299 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.03■□□□□ 0.96
CLIC1O00299 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.03■□□□□ 0.96
CLIC1O00299 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC1O00299 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.03■□□□□ 0.96
CLIC1O00299 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC1O00299 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC1O00299 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLIC1O00299 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC1O00299 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms