Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 DUSP8P3-201ENST00000399571 1760 ntBASIC22.31■■□□□ 1.16
CCDC189A1A4V9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 PVT1_1.1-201ENST00000615125 194 ntBASIC22.31■■□□□ 1.16
CCDC189A1A4V9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC189A1A4V9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC189A1A4V9 AC007375.3-201ENST00000600936 2314 ntBASIC22.3■■□□□ 1.16
CCDC189A1A4V9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 AC004448.1-201ENST00000458332 883 ntBASIC22.29■■□□□ 1.16
CCDC189A1A4V9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC189A1A4V9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 AC012354.3-201ENST00000623734 483 ntBASIC22.28■■□□□ 1.16
CCDC189A1A4V9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 EP400NL-214ENST00000641289 2402 ntBASIC22.28■■□□□ 1.16
CCDC189A1A4V9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC189A1A4V9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC189A1A4V9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.15
CCDC189A1A4V9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC189A1A4V9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC189A1A4V9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC189A1A4V9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC189A1A4V9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCDC189A1A4V9 AC010980.1-201ENST00000587192 1142 ntBASIC22.25■■□□□ 1.15
CCDC189A1A4V9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms