Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-2A0A0B4J235 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-2A0A0B4J235 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-2A0A0B4J235 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV13-2A0A0B4J235 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-2A0A0B4J235 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-2A0A0B4J235 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV13-2A0A0B4J235 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-2A0A0B4J235 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-2A0A0B4J235 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV13-2A0A0B4J235 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 AC021231.2-201ENST00000594613 730 ntBASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV13-2A0A0B4J235 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 DUX4L29-201ENST00000425409 679 ntBASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 BOD1-206ENST00000480951 814 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 AL121603.2-201ENST00000557373 2117 ntBASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 AC044849.2-201ENST00000606596 710 ntBASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV13-2A0A0B4J235 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms