Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 C1orf229-201ENST00000623686 2258 ntBASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.86■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.84■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.84■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
IGKV1D-43A0A0B4J1Z2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AC144652.1-201ENST00000609974 1624 ntBASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 GUSBP5-201ENST00000418136 578 ntBASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AC009102.2-201ENST00000606772 1639 ntBASIC19.8■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGKV1D-43A0A0B4J1Z2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms