Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 AC026202.3-201ENST00000600805 1127 ntBASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV9-2A0A087WT02 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-2A0A087WT02 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 KRT18P10-201ENST00000388836 1287 ntBASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 AC018755.3-202ENST00000596210 929 ntBASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 AC009831.1-201ENST00000580420 1582 ntBASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV9-2A0A087WT02 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV9-2A0A087WT02 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
TRAV9-2A0A087WT02 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV9-2A0A087WT02 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV9-2A0A087WT02 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
TRAV9-2A0A087WT02 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV9-2A0A087WT02 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRAV9-2A0A087WT02 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-2A0A087WT02 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-2A0A087WT02 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-2A0A087WT02 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRAV9-2A0A087WT02 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-2A0A087WT02 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRAV9-2A0A087WT02 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 TSPY13P-201ENST00000338964 914 ntBASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 AL592293.1-201ENST00000502889 1188 ntBASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV9-2A0A087WT02 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms