Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CLCA3PQ9Y6N3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.08■■□□□ 1.77
CLCA3PQ9Y6N3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLCA3PQ9Y6N3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
CLCA3PQ9Y6N3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLCA3PQ9Y6N3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLCA3PQ9Y6N3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.04■■□□□ 1.76
CLCA3PQ9Y6N3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.03■■□□□ 1.76
CLCA3PQ9Y6N3 RARRES2P7-201ENST00000567349 469 ntBASIC26.02■■□□□ 1.76
CLCA3PQ9Y6N3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLCA3PQ9Y6N3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.01■■□□□ 1.75
CLCA3PQ9Y6N3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLCA3PQ9Y6N3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLCA3PQ9Y6N3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLCA3PQ9Y6N3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLCA3PQ9Y6N3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLCA3PQ9Y6N3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCA3PQ9Y6N3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.94■■□□□ 1.74
CLCA3PQ9Y6N3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.93■■□□□ 1.74
CLCA3PQ9Y6N3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.93■■□□□ 1.74
CLCA3PQ9Y6N3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCA3PQ9Y6N3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CLCA3PQ9Y6N3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCA3PQ9Y6N3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.89■■□□□ 1.74
CLCA3PQ9Y6N3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CLCA3PQ9Y6N3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.87■■□□□ 1.73
CLCA3PQ9Y6N3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.87■■□□□ 1.73
CLCA3PQ9Y6N3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCA3PQ9Y6N3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCA3PQ9Y6N3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.85■■□□□ 1.73
CLCA3PQ9Y6N3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.85■■□□□ 1.73
CLCA3PQ9Y6N3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CLCA3PQ9Y6N3 SETD8P1-201ENST00000623146 1180 ntBASIC25.85■■□□□ 1.73
CLCA3PQ9Y6N3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CLCA3PQ9Y6N3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLCA3PQ9Y6N3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CLCA3PQ9Y6N3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLCA3PQ9Y6N3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLCA3PQ9Y6N3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.81■■□□□ 1.72
CLCA3PQ9Y6N3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLCA3PQ9Y6N3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.8■■□□□ 1.72
CLCA3PQ9Y6N3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLCA3PQ9Y6N3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLCA3PQ9Y6N3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLCA3PQ9Y6N3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.79■■□□□ 1.72
CLCA3PQ9Y6N3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.78■■□□□ 1.72
CLCA3PQ9Y6N3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.78■■□□□ 1.72
CLCA3PQ9Y6N3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CLCA3PQ9Y6N3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CLCA3PQ9Y6N3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CLCA3PQ9Y6N3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CLCA3PQ9Y6N3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CLCA3PQ9Y6N3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CLCA3PQ9Y6N3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CLCA3PQ9Y6N3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.74■■□□□ 1.71
CLCA3PQ9Y6N3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CLCA3PQ9Y6N3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CLCA3PQ9Y6N3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.72■■□□□ 1.71
CLCA3PQ9Y6N3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLCA3PQ9Y6N3 AC097358.2-201ENST00000607541 1159 ntBASIC25.72■■□□□ 1.71
CLCA3PQ9Y6N3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.71■■□□□ 1.71
CLCA3PQ9Y6N3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.7■■□□□ 1.7
CLCA3PQ9Y6N3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLCA3PQ9Y6N3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.68■■□□□ 1.7
CLCA3PQ9Y6N3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CLCA3PQ9Y6N3 AL133380.1-201ENST00000506013 324 ntBASIC25.68■■□□□ 1.7
CLCA3PQ9Y6N3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.67■■□□□ 1.7
CLCA3PQ9Y6N3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLCA3PQ9Y6N3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLCA3PQ9Y6N3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLCA3PQ9Y6N3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLCA3PQ9Y6N3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CLCA3PQ9Y6N3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CLCA3PQ9Y6N3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CLCA3PQ9Y6N3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.63■■□□□ 1.69
CLCA3PQ9Y6N3 AC136428.2-201ENST00000563187 214 ntBASIC25.63■■□□□ 1.69
CLCA3PQ9Y6N3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.63■■□□□ 1.69
CLCA3PQ9Y6N3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CLCA3PQ9Y6N3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CLCA3PQ9Y6N3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CLCA3PQ9Y6N3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.59■■□□□ 1.69
CLCA3PQ9Y6N3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.59■■□□□ 1.69
CLCA3PQ9Y6N3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.59■■□□□ 1.69
CLCA3PQ9Y6N3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CLCA3PQ9Y6N3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CLCA3PQ9Y6N3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLCA3PQ9Y6N3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.57■■□□□ 1.68
CLCA3PQ9Y6N3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLCA3PQ9Y6N3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CLCA3PQ9Y6N3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLCA3PQ9Y6N3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CLCA3PQ9Y6N3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLCA3PQ9Y6N3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.56■■□□□ 1.68
CLCA3PQ9Y6N3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLCA3PQ9Y6N3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.55■■□□□ 1.68
CLCA3PQ9Y6N3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.54■■□□□ 1.68
CLCA3PQ9Y6N3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
CLCA3PQ9Y6N3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLCA3PQ9Y6N3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLCA3PQ9Y6N3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms