Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHA9Q9Y5H5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHA9Q9Y5H5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA9Q9Y5H5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA9Q9Y5H5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA9Q9Y5H5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA9Q9Y5H5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
PCDHA9Q9Y5H5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
PCDHA9Q9Y5H5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA9Q9Y5H5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA9Q9Y5H5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA9Q9Y5H5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA9Q9Y5H5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA9Q9Y5H5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHA9Q9Y5H5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA9Q9Y5H5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA9Q9Y5H5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA9Q9Y5H5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA9Q9Y5H5 DYNLL1-208ENST00000550178 581 ntBASIC26.66■■□□□ 1.86
PCDHA9Q9Y5H5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PCDHA9Q9Y5H5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.66■■□□□ 1.86
PCDHA9Q9Y5H5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.65■■□□□ 1.86
PCDHA9Q9Y5H5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA9Q9Y5H5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHA9Q9Y5H5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA9Q9Y5H5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
PCDHA9Q9Y5H5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA9Q9Y5H5 AP002365.1-201ENST00000603448 772 ntBASIC26.62■■□□□ 1.85
PCDHA9Q9Y5H5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA9Q9Y5H5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA9Q9Y5H5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA9Q9Y5H5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA9Q9Y5H5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHA9Q9Y5H5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.58■■□□□ 1.85
PCDHA9Q9Y5H5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDHA9Q9Y5H5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA9Q9Y5H5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
PCDHA9Q9Y5H5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA9Q9Y5H5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA9Q9Y5H5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHA9Q9Y5H5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
PCDHA9Q9Y5H5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.55■■□□□ 1.84
PCDHA9Q9Y5H5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHA9Q9Y5H5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.54■■□□□ 1.84
PCDHA9Q9Y5H5 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.52■■□□□ 1.84
PCDHA9Q9Y5H5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHA9Q9Y5H5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDHA9Q9Y5H5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHA9Q9Y5H5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PCDHA9Q9Y5H5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHA9Q9Y5H5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHA9Q9Y5H5 AL031258.1-201ENST00000623562 325 ntBASIC26.49■■□□□ 1.83
PCDHA9Q9Y5H5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHA9Q9Y5H5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHA9Q9Y5H5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHA9Q9Y5H5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
PCDHA9Q9Y5H5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHA9Q9Y5H5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.42■■□□□ 1.82
PCDHA9Q9Y5H5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
PCDHA9Q9Y5H5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA9Q9Y5H5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDHA9Q9Y5H5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHA9Q9Y5H5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHA9Q9Y5H5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHA9Q9Y5H5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
PCDHA9Q9Y5H5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHA9Q9Y5H5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.36■■□□□ 1.81
PCDHA9Q9Y5H5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA9Q9Y5H5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.35■■□□□ 1.81
PCDHA9Q9Y5H5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHA9Q9Y5H5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHA9Q9Y5H5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHA9Q9Y5H5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHA9Q9Y5H5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHA9Q9Y5H5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
PCDHA9Q9Y5H5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.31■■□□□ 1.8
PCDHA9Q9Y5H5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA9Q9Y5H5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PCDHA9Q9Y5H5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA9Q9Y5H5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHA9Q9Y5H5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA9Q9Y5H5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA9Q9Y5H5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA9Q9Y5H5 AC120057.4-201ENST00000624722 1615 ntBASIC26.26■■□□□ 1.79
PCDHA9Q9Y5H5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA9Q9Y5H5 ABCB10P1-201ENST00000614297 2181 ntBASIC26.26■■□□□ 1.79
PCDHA9Q9Y5H5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA9Q9Y5H5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA9Q9Y5H5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA9Q9Y5H5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA9Q9Y5H5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDHA9Q9Y5H5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA9Q9Y5H5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA9Q9Y5H5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA9Q9Y5H5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA9Q9Y5H5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHA9Q9Y5H5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA9Q9Y5H5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA9Q9Y5H5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHA9Q9Y5H5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms