Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHGA2Q9Y5H1 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.62■■■□□ 2.17
PCDHGA2Q9Y5H1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.61■■■□□ 2.17
PCDHGA2Q9Y5H1 ABHD17AP4-201ENST00000411545 909 ntBASIC28.61■■■□□ 2.17
PCDHGA2Q9Y5H1 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.59■■■□□ 2.17
PCDHGA2Q9Y5H1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHGA2Q9Y5H1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
PCDHGA2Q9Y5H1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.58■■■□□ 2.17
PCDHGA2Q9Y5H1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHGA2Q9Y5H1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHGA2Q9Y5H1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
PCDHGA2Q9Y5H1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGA2Q9Y5H1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.53■■■□□ 2.16
PCDHGA2Q9Y5H1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PCDHGA2Q9Y5H1 MIR3665-201ENST00000578708 105 ntBASIC28.53■■■□□ 2.16
PCDHGA2Q9Y5H1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.51■■■□□ 2.15
PCDHGA2Q9Y5H1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHGA2Q9Y5H1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.47■■■□□ 2.15
PCDHGA2Q9Y5H1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.47■■■□□ 2.15
PCDHGA2Q9Y5H1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHGA2Q9Y5H1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.47■■■□□ 2.15
PCDHGA2Q9Y5H1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHGA2Q9Y5H1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.45■■■□□ 2.14
PCDHGA2Q9Y5H1 AL133380.1-201ENST00000506013 324 ntBASIC28.44■■■□□ 2.14
PCDHGA2Q9Y5H1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDHGA2Q9Y5H1 HLA-V-202ENST00000446817 847 ntBASIC28.41■■■□□ 2.14
PCDHGA2Q9Y5H1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHGA2Q9Y5H1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.39■■■□□ 2.14
PCDHGA2Q9Y5H1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.38■■■□□ 2.13
PCDHGA2Q9Y5H1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHGA2Q9Y5H1 AC145285.7-201ENST00000614819 1539 ntBASIC28.38■■■□□ 2.13
PCDHGA2Q9Y5H1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
PCDHGA2Q9Y5H1 AC087741.3-201ENST00000624270 1347 ntBASIC28.37■■■□□ 2.13
PCDHGA2Q9Y5H1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGA2Q9Y5H1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHGA2Q9Y5H1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.34■■■□□ 2.13
PCDHGA2Q9Y5H1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.34■■■□□ 2.13
PCDHGA2Q9Y5H1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHGA2Q9Y5H1 AC044849.2-201ENST00000606596 710 ntBASIC28.31■■■□□ 2.12
PCDHGA2Q9Y5H1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.29■■■□□ 2.12
PCDHGA2Q9Y5H1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHGA2Q9Y5H1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
PCDHGA2Q9Y5H1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.27■■■□□ 2.12
PCDHGA2Q9Y5H1 DUX4L28-201ENST00000623687 678 ntBASIC28.27■■■□□ 2.12
PCDHGA2Q9Y5H1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHGA2Q9Y5H1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHGA2Q9Y5H1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
PCDHGA2Q9Y5H1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHGA2Q9Y5H1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
PCDHGA2Q9Y5H1 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.22■■■□□ 2.11
PCDHGA2Q9Y5H1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.21■■■□□ 2.11
PCDHGA2Q9Y5H1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHGA2Q9Y5H1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.2■■■□□ 2.11
PCDHGA2Q9Y5H1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
PCDHGA2Q9Y5H1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PCDHGA2Q9Y5H1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.17■■■□□ 2.1
PCDHGA2Q9Y5H1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
PCDHGA2Q9Y5H1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.15■■■□□ 2.1
PCDHGA2Q9Y5H1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.14■■■□□ 2.1
PCDHGA2Q9Y5H1 MIR762-201ENST00000390236 83 ntBASIC28.14■■■□□ 2.1
PCDHGA2Q9Y5H1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGA2Q9Y5H1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.13■■■□□ 2.09
PCDHGA2Q9Y5H1 AC005559.1-201ENST00000589661 871 ntBASIC28.13■■■□□ 2.09
PCDHGA2Q9Y5H1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.11■■■□□ 2.09
PCDHGA2Q9Y5H1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHGA2Q9Y5H1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.09■■■□□ 2.09
PCDHGA2Q9Y5H1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.09■■■□□ 2.09
PCDHGA2Q9Y5H1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.09■■■□□ 2.09
PCDHGA2Q9Y5H1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.08■■■□□ 2.09
PCDHGA2Q9Y5H1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.08■■■□□ 2.09
PCDHGA2Q9Y5H1 ZNRF2P2-203ENST00000454624 420 ntBASIC28.07■■■□□ 2.08
PCDHGA2Q9Y5H1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.07■■■□□ 2.08
PCDHGA2Q9Y5H1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGA2Q9Y5H1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.06■■■□□ 2.08
PCDHGA2Q9Y5H1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHGA2Q9Y5H1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHGA2Q9Y5H1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHGA2Q9Y5H1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.04■■■□□ 2.08
PCDHGA2Q9Y5H1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHGA2Q9Y5H1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGA2Q9Y5H1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.02■■■□□ 2.08
PCDHGA2Q9Y5H1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHGA2Q9Y5H1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.01■■■□□ 2.07
PCDHGA2Q9Y5H1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHGA2Q9Y5H1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.01■■■□□ 2.07
PCDHGA2Q9Y5H1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHGA2Q9Y5H1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHGA2Q9Y5H1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.97■■■□□ 2.07
PCDHGA2Q9Y5H1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHGA2Q9Y5H1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PCDHGA2Q9Y5H1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
PCDHGA2Q9Y5H1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PCDHGA2Q9Y5H1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHGA2Q9Y5H1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHGA2Q9Y5H1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
PCDHGA2Q9Y5H1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.89■■■□□ 2.06
PCDHGA2Q9Y5H1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.87■■■□□ 2.05
PCDHGA2Q9Y5H1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
PCDHGA2Q9Y5H1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.86■■■□□ 2.05
PCDHGA2Q9Y5H1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.86■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms