Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 CAHM-201ENST00000604200 896 ntBASIC26.83■■□□□ 1.89
CPNE5Q9HCH3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.83■■□□□ 1.89
CPNE5Q9HCH3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CPNE5Q9HCH3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CPNE5Q9HCH3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.81■■□□□ 1.88
CPNE5Q9HCH3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CPNE5Q9HCH3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPNE5Q9HCH3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CPNE5Q9HCH3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CPNE5Q9HCH3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CPNE5Q9HCH3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.75■■□□□ 1.87
CPNE5Q9HCH3 AP006261.1-201ENST00000584783 668 ntBASIC26.75■■□□□ 1.87
CPNE5Q9HCH3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CPNE5Q9HCH3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CPNE5Q9HCH3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CPNE5Q9HCH3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.7■■□□□ 1.86
CPNE5Q9HCH3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CPNE5Q9HCH3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.69■■□□□ 1.86
CPNE5Q9HCH3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CPNE5Q9HCH3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.68■■□□□ 1.86
CPNE5Q9HCH3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.68■■□□□ 1.86
CPNE5Q9HCH3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.68■■□□□ 1.86
CPNE5Q9HCH3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPNE5Q9HCH3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 MIR7108-201ENST00000614319 87 ntBASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE5Q9HCH3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CPNE5Q9HCH3 AL391121.1-201ENST00000607967 1349 ntBASIC26.65■■□□□ 1.86
CPNE5Q9HCH3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CPNE5Q9HCH3 ABHD17AP4-201ENST00000411545 909 ntBASIC26.61■■□□□ 1.85
CPNE5Q9HCH3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CPNE5Q9HCH3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CPNE5Q9HCH3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.58■■□□□ 1.85
CPNE5Q9HCH3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CPNE5Q9HCH3 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.56■■□□□ 1.84
CPNE5Q9HCH3 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.56■■□□□ 1.84
CPNE5Q9HCH3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CPNE5Q9HCH3 AC145285.7-201ENST00000614819 1539 ntBASIC26.54■■□□□ 1.84
CPNE5Q9HCH3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CPNE5Q9HCH3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPNE5Q9HCH3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.52■■□□□ 1.84
CPNE5Q9HCH3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CPNE5Q9HCH3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.51■■□□□ 1.83
CPNE5Q9HCH3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.5■■□□□ 1.83
CPNE5Q9HCH3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CPNE5Q9HCH3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPNE5Q9HCH3 AL133380.1-201ENST00000506013 324 ntBASIC26.47■■□□□ 1.83
CPNE5Q9HCH3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPNE5Q9HCH3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.47■■□□□ 1.83
CPNE5Q9HCH3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.46■■□□□ 1.83
CPNE5Q9HCH3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
CPNE5Q9HCH3 MIR3665-201ENST00000578708 105 ntBASIC26.45■■□□□ 1.82
CPNE5Q9HCH3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CPNE5Q9HCH3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.44■■□□□ 1.82
CPNE5Q9HCH3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.43■■□□□ 1.82
CPNE5Q9HCH3 HLA-V-202ENST00000446817 847 ntBASIC26.43■■□□□ 1.82
CPNE5Q9HCH3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.43■■□□□ 1.82
CPNE5Q9HCH3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.42■■□□□ 1.82
CPNE5Q9HCH3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPNE5Q9HCH3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CPNE5Q9HCH3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CPNE5Q9HCH3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.41■■□□□ 1.82
CPNE5Q9HCH3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CPNE5Q9HCH3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPNE5Q9HCH3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPNE5Q9HCH3 AC087741.3-201ENST00000624270 1347 ntBASIC26.38■■□□□ 1.81
CPNE5Q9HCH3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CPNE5Q9HCH3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CPNE5Q9HCH3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.36■■□□□ 1.81
CPNE5Q9HCH3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CPNE5Q9HCH3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CPNE5Q9HCH3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CPNE5Q9HCH3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.32■■□□□ 1.8
CPNE5Q9HCH3 DUX4L28-201ENST00000623687 678 ntBASIC26.32■■□□□ 1.8
CPNE5Q9HCH3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE5Q9HCH3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE5Q9HCH3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.31■■□□□ 1.8
CPNE5Q9HCH3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CPNE5Q9HCH3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.29■■□□□ 1.8
CPNE5Q9HCH3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CPNE5Q9HCH3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CPNE5Q9HCH3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CPNE5Q9HCH3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CPNE5Q9HCH3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CPNE5Q9HCH3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.26■■□□□ 1.79
CPNE5Q9HCH3 AC044849.2-201ENST00000606596 710 ntBASIC26.26■■□□□ 1.79
CPNE5Q9HCH3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CPNE5Q9HCH3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CPNE5Q9HCH3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CPNE5Q9HCH3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.22■■□□□ 1.79
CPNE5Q9HCH3 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.2■■□□□ 1.78
CPNE5Q9HCH3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CPNE5Q9HCH3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.19■■□□□ 1.78
CPNE5Q9HCH3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.19■■□□□ 1.78
CPNE5Q9HCH3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms