Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
CDH23Q9H251 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
CDH23Q9H251 AC145285.7-201ENST00000614819 1539 ntBASIC30.7■■■□□ 2.5
CDH23Q9H251 AC087741.3-201ENST00000624270 1347 ntBASIC30.68■■■□□ 2.5
CDH23Q9H251 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
CDH23Q9H251 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.65■■■□□ 2.5
CDH23Q9H251 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
CDH23Q9H251 MIR3665-201ENST00000578708 105 ntBASIC30.59■■■□□ 2.49
CDH23Q9H251 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CDH23Q9H251 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDH23Q9H251 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.57■■■□□ 2.48
CDH23Q9H251 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CDH23Q9H251 DUX4L28-201ENST00000623687 678 ntBASIC30.56■■■□□ 2.48
CDH23Q9H251 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.56■■■□□ 2.48
CDH23Q9H251 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.55■■■□□ 2.48
CDH23Q9H251 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDH23Q9H251 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
CDH23Q9H251 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.52■■■□□ 2.48
CDH23Q9H251 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDH23Q9H251 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.5■■■□□ 2.47
CDH23Q9H251 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.49■■■□□ 2.47
CDH23Q9H251 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.49■■■□□ 2.47
CDH23Q9H251 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.49■■■□□ 2.47
CDH23Q9H251 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDH23Q9H251 AL133380.1-201ENST00000506013 324 ntBASIC30.47■■■□□ 2.47
CDH23Q9H251 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CDH23Q9H251 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDH23Q9H251 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDH23Q9H251 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CDH23Q9H251 AC044849.2-201ENST00000606596 710 ntBASIC30.44■■■□□ 2.46
CDH23Q9H251 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.43■■■□□ 2.46
CDH23Q9H251 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.43■■■□□ 2.46
CDH23Q9H251 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.42■■■□□ 2.46
CDH23Q9H251 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.42■■■□□ 2.46
CDH23Q9H251 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.41■■■□□ 2.46
CDH23Q9H251 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
CDH23Q9H251 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
CDH23Q9H251 MIR4449-201ENST00000578365 66 ntBASIC30.39■■■□□ 2.46
CDH23Q9H251 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CDH23Q9H251 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
CDH23Q9H251 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CDH23Q9H251 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.35■■■□□ 2.45
CDH23Q9H251 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDH23Q9H251 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.33■■■□□ 2.45
CDH23Q9H251 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.33■■■□□ 2.45
CDH23Q9H251 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.33■■■□□ 2.45
CDH23Q9H251 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDH23Q9H251 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.31■■■□□ 2.44
CDH23Q9H251 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CDH23Q9H251 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.29■■■□□ 2.44
CDH23Q9H251 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.28■■■□□ 2.44
CDH23Q9H251 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CDH23Q9H251 MIR762-201ENST00000390236 83 ntBASIC30.27■■■□□ 2.44
CDH23Q9H251 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CDH23Q9H251 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.24■■■□□ 2.43
CDH23Q9H251 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CDH23Q9H251 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDH23Q9H251 AC005559.1-201ENST00000589661 871 ntBASIC30.23■■■□□ 2.43
CDH23Q9H251 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.19■■■□□ 2.42
CDH23Q9H251 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDH23Q9H251 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.17■■■□□ 2.42
CDH23Q9H251 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDH23Q9H251 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDH23Q9H251 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CDH23Q9H251 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDH23Q9H251 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CDH23Q9H251 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.12■■■□□ 2.41
CDH23Q9H251 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
CDH23Q9H251 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.09■■■□□ 2.41
CDH23Q9H251 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CDH23Q9H251 ZNRF2P2-203ENST00000454624 420 ntBASIC30.08■■■□□ 2.41
CDH23Q9H251 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.07■■■□□ 2.41
CDH23Q9H251 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDH23Q9H251 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CDH23Q9H251 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CDH23Q9H251 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.05■■■□□ 2.4
CDH23Q9H251 HSD17B1P1-201ENST00000590052 955 ntBASIC30.05■■■□□ 2.4
CDH23Q9H251 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.03■■■□□ 2.4
CDH23Q9H251 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
CDH23Q9H251 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.02■■■□□ 2.4
CDH23Q9H251 MIR639-201ENST00000384974 98 ntBASIC29.98■■■□□ 2.39
CDH23Q9H251 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CDH23Q9H251 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.97■■■□□ 2.39
CDH23Q9H251 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CDH23Q9H251 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CDH23Q9H251 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.95■■■□□ 2.39
CDH23Q9H251 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CDH23Q9H251 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDH23Q9H251 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CDH23Q9H251 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CDH23Q9H251 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.92■■■□□ 2.38
CDH23Q9H251 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDH23Q9H251 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.9■■■□□ 2.38
CDH23Q9H251 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.88■■■□□ 2.37
CDH23Q9H251 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.88■■■□□ 2.37
CDH23Q9H251 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDH23Q9H251 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
CDH23Q9H251 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDH23Q9H251 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDH23Q9H251 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms