Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UBE2OQ9C0C9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
UBE2OQ9C0C9 MIR3665-201ENST00000578708 105 ntBASIC31.39■■■□□ 2.62
UBE2OQ9C0C9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
UBE2OQ9C0C9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.36■■■□□ 2.61
UBE2OQ9C0C9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
UBE2OQ9C0C9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
UBE2OQ9C0C9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.35■■■□□ 2.61
UBE2OQ9C0C9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
UBE2OQ9C0C9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.33■■■□□ 2.61
UBE2OQ9C0C9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.33■■■□□ 2.61
UBE2OQ9C0C9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.27■■■□□ 2.6
UBE2OQ9C0C9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
UBE2OQ9C0C9 AC087741.3-201ENST00000624270 1347 ntBASIC31.24■■■□□ 2.59
UBE2OQ9C0C9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
UBE2OQ9C0C9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
UBE2OQ9C0C9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.22■■■□□ 2.59
UBE2OQ9C0C9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
UBE2OQ9C0C9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
UBE2OQ9C0C9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
UBE2OQ9C0C9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.17■■■□□ 2.58
UBE2OQ9C0C9 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.17■■■□□ 2.58
UBE2OQ9C0C9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
UBE2OQ9C0C9 AL133380.1-201ENST00000506013 324 ntBASIC31.16■■■□□ 2.58
UBE2OQ9C0C9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
UBE2OQ9C0C9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.15■■■□□ 2.58
UBE2OQ9C0C9 AC044849.2-201ENST00000606596 710 ntBASIC31.15■■■□□ 2.58
UBE2OQ9C0C9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.14■■■□□ 2.58
UBE2OQ9C0C9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
UBE2OQ9C0C9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 DUX4L28-201ENST00000623687 678 ntBASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
UBE2OQ9C0C9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.1■■■□□ 2.57
UBE2OQ9C0C9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
UBE2OQ9C0C9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.08■■■□□ 2.57
UBE2OQ9C0C9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
UBE2OQ9C0C9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
UBE2OQ9C0C9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
UBE2OQ9C0C9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
UBE2OQ9C0C9 ZNRF2P2-203ENST00000454624 420 ntBASIC31.01■■■□□ 2.55
UBE2OQ9C0C9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.01■■■□□ 2.55
UBE2OQ9C0C9 AC145285.7-201ENST00000614819 1539 ntBASIC30.99■■■□□ 2.55
UBE2OQ9C0C9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
UBE2OQ9C0C9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
UBE2OQ9C0C9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
UBE2OQ9C0C9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.98■■■□□ 2.55
UBE2OQ9C0C9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
UBE2OQ9C0C9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
UBE2OQ9C0C9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.94■■■□□ 2.54
UBE2OQ9C0C9 AC005559.1-201ENST00000589661 871 ntBASIC30.92■■■□□ 2.54
UBE2OQ9C0C9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 MIR762-201ENST00000390236 83 ntBASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.89■■■□□ 2.54
UBE2OQ9C0C9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
UBE2OQ9C0C9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
UBE2OQ9C0C9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
UBE2OQ9C0C9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
UBE2OQ9C0C9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
UBE2OQ9C0C9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
UBE2OQ9C0C9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.85■■■□□ 2.53
UBE2OQ9C0C9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
UBE2OQ9C0C9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.82■■■□□ 2.52
UBE2OQ9C0C9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
UBE2OQ9C0C9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.82■■■□□ 2.52
UBE2OQ9C0C9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
UBE2OQ9C0C9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
UBE2OQ9C0C9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
UBE2OQ9C0C9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.77■■■□□ 2.52
UBE2OQ9C0C9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.77■■■□□ 2.52
UBE2OQ9C0C9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
UBE2OQ9C0C9 MIR4449-201ENST00000578365 66 ntBASIC30.74■■■□□ 2.51
UBE2OQ9C0C9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
UBE2OQ9C0C9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.72■■■□□ 2.51
UBE2OQ9C0C9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.72■■■□□ 2.51
UBE2OQ9C0C9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.72■■■□□ 2.51
UBE2OQ9C0C9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.7■■■□□ 2.5
UBE2OQ9C0C9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.69■■■□□ 2.5
UBE2OQ9C0C9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
UBE2OQ9C0C9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
UBE2OQ9C0C9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
UBE2OQ9C0C9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
UBE2OQ9C0C9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
UBE2OQ9C0C9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
UBE2OQ9C0C9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBE2OQ9C0C9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBE2OQ9C0C9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.62■■■□□ 2.49
UBE2OQ9C0C9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
UBE2OQ9C0C9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
UBE2OQ9C0C9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.58■■■□□ 2.49
UBE2OQ9C0C9 MIR639-201ENST00000384974 98 ntBASIC30.58■■■□□ 2.49
UBE2OQ9C0C9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms