Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
MUC4Q99102 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.27■□□□□ 0.83
MUC4Q99102 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.26■□□□□ 0.83
MUC4Q99102 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.26■□□□□ 0.83
MUC4Q99102 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MUC4Q99102 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MUC4Q99102 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MUC4Q99102 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MUC4Q99102 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.25■□□□□ 0.83
MUC4Q99102 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MUC4Q99102 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.24■□□□□ 0.83
MUC4Q99102 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.23■□□□□ 0.83
MUC4Q99102 AP002365.1-201ENST00000603448 772 ntBASIC20.23■□□□□ 0.83
MUC4Q99102 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MUC4Q99102 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MUC4Q99102 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MUC4Q99102 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.21■□□□□ 0.83
MUC4Q99102 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MUC4Q99102 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MUC4Q99102 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MUC4Q99102 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MUC4Q99102 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MUC4Q99102 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MUC4Q99102 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.15■□□□□ 0.82
MUC4Q99102 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MUC4Q99102 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.14■□□□□ 0.81
MUC4Q99102 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.13■□□□□ 0.81
MUC4Q99102 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MUC4Q99102 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MUC4Q99102 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MUC4Q99102 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
MUC4Q99102 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MUC4Q99102 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MUC4Q99102 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MUC4Q99102 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MUC4Q99102 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
MUC4Q99102 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.07■□□□□ 0.8
MUC4Q99102 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MUC4Q99102 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.06■□□□□ 0.8
MUC4Q99102 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MUC4Q99102 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MUC4Q99102 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.05■□□□□ 0.8
MUC4Q99102 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
MUC4Q99102 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MUC4Q99102 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
MUC4Q99102 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MUC4Q99102 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MUC4Q99102 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MUC4Q99102 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MUC4Q99102 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MUC4Q99102 AC120057.4-201ENST00000624722 1615 ntBASIC20.03■□□□□ 0.8
MUC4Q99102 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MUC4Q99102 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MUC4Q99102 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MUC4Q99102 DYNLL1-208ENST00000550178 581 ntBASIC20.01■□□□□ 0.79
MUC4Q99102 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.01■□□□□ 0.79
MUC4Q99102 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MUC4Q99102 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MUC4Q99102 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20■□□□□ 0.79
MUC4Q99102 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MUC4Q99102 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.98■□□□□ 0.79
MUC4Q99102 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.98■□□□□ 0.79
MUC4Q99102 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MUC4Q99102 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
MUC4Q99102 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.95■□□□□ 0.78
MUC4Q99102 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MUC4Q99102 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
MUC4Q99102 ABCB10P1-201ENST00000614297 2181 ntBASIC19.94■□□□□ 0.78
MUC4Q99102 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MUC4Q99102 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MUC4Q99102 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MUC4Q99102 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.94■□□□□ 0.78
MUC4Q99102 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
MUC4Q99102 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MUC4Q99102 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.93■□□□□ 0.78
MUC4Q99102 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MUC4Q99102 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MUC4Q99102 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.92■□□□□ 0.78
MUC4Q99102 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MUC4Q99102 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.91■□□□□ 0.78
MUC4Q99102 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MUC4Q99102 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MUC4Q99102 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.91■□□□□ 0.78
MUC4Q99102 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MUC4Q99102 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MUC4Q99102 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MUC4Q99102 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MUC4Q99102 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MUC4Q99102 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MUC4Q99102 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.89■□□□□ 0.77
MUC4Q99102 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MUC4Q99102 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.88■□□□□ 0.77
MUC4Q99102 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MUC4Q99102 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.87■□□□□ 0.77
MUC4Q99102 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MUC4Q99102 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MUC4Q99102 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MUC4Q99102 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MUC4Q99102 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MUC4Q99102 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms