Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ALPK3Q96L96 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.66■■■□□ 2.66
ALPK3Q96L96 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.65■■■□□ 2.66
ALPK3Q96L96 DUX4L28-201ENST00000623687 678 ntBASIC31.65■■■□□ 2.66
ALPK3Q96L96 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ALPK3Q96L96 AC145285.7-201ENST00000614819 1539 ntBASIC31.62■■■□□ 2.65
ALPK3Q96L96 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.61■■■□□ 2.65
ALPK3Q96L96 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.61■■■□□ 2.65
ALPK3Q96L96 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ALPK3Q96L96 AC087741.3-201ENST00000624270 1347 ntBASIC31.6■■■□□ 2.65
ALPK3Q96L96 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
ALPK3Q96L96 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ALPK3Q96L96 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ALPK3Q96L96 MIR3665-201ENST00000578708 105 ntBASIC31.59■■■□□ 2.65
ALPK3Q96L96 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.58■■■□□ 2.65
ALPK3Q96L96 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
ALPK3Q96L96 AC044849.2-201ENST00000606596 710 ntBASIC31.57■■■□□ 2.64
ALPK3Q96L96 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.55■■■□□ 2.64
ALPK3Q96L96 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.53■■■□□ 2.64
ALPK3Q96L96 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.53■■■□□ 2.64
ALPK3Q96L96 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
ALPK3Q96L96 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
ALPK3Q96L96 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ALPK3Q96L96 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.5■■■□□ 2.63
ALPK3Q96L96 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ALPK3Q96L96 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ALPK3Q96L96 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.44■■■□□ 2.62
ALPK3Q96L96 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.44■■■□□ 2.62
ALPK3Q96L96 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
ALPK3Q96L96 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
ALPK3Q96L96 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.42■■■□□ 2.62
ALPK3Q96L96 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.41■■■□□ 2.62
ALPK3Q96L96 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.39■■■□□ 2.62
ALPK3Q96L96 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ALPK3Q96L96 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.37■■■□□ 2.61
ALPK3Q96L96 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ALPK3Q96L96 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
ALPK3Q96L96 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.35■■■□□ 2.61
ALPK3Q96L96 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.34■■■□□ 2.61
ALPK3Q96L96 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.34■■■□□ 2.61
ALPK3Q96L96 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.33■■■□□ 2.61
ALPK3Q96L96 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ALPK3Q96L96 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ALPK3Q96L96 AC005559.1-201ENST00000589661 871 ntBASIC31.31■■■□□ 2.6
ALPK3Q96L96 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ALPK3Q96L96 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.29■■■□□ 2.6
ALPK3Q96L96 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.28■■■□□ 2.6
ALPK3Q96L96 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.28■■■□□ 2.6
ALPK3Q96L96 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
ALPK3Q96L96 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ALPK3Q96L96 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ALPK3Q96L96 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ALPK3Q96L96 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.26■■■□□ 2.59
ALPK3Q96L96 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.25■■■□□ 2.59
ALPK3Q96L96 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.24■■■□□ 2.59
ALPK3Q96L96 MIR762-201ENST00000390236 83 ntBASIC31.22■■■□□ 2.59
ALPK3Q96L96 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ALPK3Q96L96 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.19■■■□□ 2.58
ALPK3Q96L96 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.19■■■□□ 2.58
ALPK3Q96L96 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ALPK3Q96L96 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ALPK3Q96L96 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ALPK3Q96L96 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ALPK3Q96L96 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
ALPK3Q96L96 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.13■■■□□ 2.57
ALPK3Q96L96 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ALPK3Q96L96 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ALPK3Q96L96 ZNRF2P2-203ENST00000454624 420 ntBASIC31.1■■■□□ 2.57
ALPK3Q96L96 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.1■■■□□ 2.57
ALPK3Q96L96 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ALPK3Q96L96 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.09■■■□□ 2.57
ALPK3Q96L96 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.08■■■□□ 2.57
ALPK3Q96L96 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.08■■■□□ 2.57
ALPK3Q96L96 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
ALPK3Q96L96 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.07■■■□□ 2.56
ALPK3Q96L96 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
ALPK3Q96L96 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.06■■■□□ 2.56
ALPK3Q96L96 MIR4449-201ENST00000578365 66 ntBASIC31.04■■■□□ 2.56
ALPK3Q96L96 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
ALPK3Q96L96 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
ALPK3Q96L96 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.02■■■□□ 2.56
ALPK3Q96L96 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ALPK3Q96L96 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.96■■■□□ 2.55
ALPK3Q96L96 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.95■■■□□ 2.55
ALPK3Q96L96 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ALPK3Q96L96 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.94■■■□□ 2.54
ALPK3Q96L96 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ALPK3Q96L96 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
ALPK3Q96L96 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.93■■■□□ 2.54
ALPK3Q96L96 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ALPK3Q96L96 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.91■■■□□ 2.54
ALPK3Q96L96 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
ALPK3Q96L96 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
ALPK3Q96L96 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ALPK3Q96L96 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ALPK3Q96L96 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.86■■■□□ 2.53
ALPK3Q96L96 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ALPK3Q96L96 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ALPK3Q96L96 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.83■■■□□ 2.53
ALPK3Q96L96 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms