Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SLC25A28Q96A46 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC25A28Q96A46 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SLC25A28Q96A46 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.13■■□□□ 1.45
SLC25A28Q96A46 AP002365.1-201ENST00000603448 772 ntBASIC24.13■■□□□ 1.45
SLC25A28Q96A46 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC25A28Q96A46 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC25A28Q96A46 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.12■■□□□ 1.45
SLC25A28Q96A46 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.11■■□□□ 1.45
SLC25A28Q96A46 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SLC25A28Q96A46 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SLC25A28Q96A46 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SLC25A28Q96A46 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SLC25A28Q96A46 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SLC25A28Q96A46 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SLC25A28Q96A46 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SLC25A28Q96A46 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC25A28Q96A46 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC25A28Q96A46 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC25A28Q96A46 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC25A28Q96A46 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.02■■□□□ 1.44
SLC25A28Q96A46 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC25A28Q96A46 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC25A28Q96A46 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC25A28Q96A46 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC25A28Q96A46 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC25A28Q96A46 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.95■■□□□ 1.43
SLC25A28Q96A46 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SLC25A28Q96A46 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.94■■□□□ 1.42
SLC25A28Q96A46 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SLC25A28Q96A46 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC25A28Q96A46 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.92■■□□□ 1.42
SLC25A28Q96A46 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC25A28Q96A46 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC25A28Q96A46 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.9■■□□□ 1.42
SLC25A28Q96A46 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
SLC25A28Q96A46 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SLC25A28Q96A46 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.88■■□□□ 1.41
SLC25A28Q96A46 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SLC25A28Q96A46 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC25A28Q96A46 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.87■■□□□ 1.41
SLC25A28Q96A46 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC25A28Q96A46 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SLC25A28Q96A46 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.85■■□□□ 1.41
SLC25A28Q96A46 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC25A28Q96A46 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SLC25A28Q96A46 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SLC25A28Q96A46 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
SLC25A28Q96A46 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.83■■□□□ 1.41
SLC25A28Q96A46 AC120057.4-201ENST00000624722 1615 ntBASIC23.83■■□□□ 1.41
SLC25A28Q96A46 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SLC25A28Q96A46 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SLC25A28Q96A46 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC25A28Q96A46 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SLC25A28Q96A46 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC25A28Q96A46 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC25A28Q96A46 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.8■■□□□ 1.4
SLC25A28Q96A46 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC25A28Q96A46 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC25A28Q96A46 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC25A28Q96A46 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC25A28Q96A46 ABCB10P1-201ENST00000614297 2181 ntBASIC23.76■■□□□ 1.39
SLC25A28Q96A46 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC25A28Q96A46 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC25A28Q96A46 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC25A28Q96A46 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC25A28Q96A46 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC25A28Q96A46 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.74■■□□□ 1.39
SLC25A28Q96A46 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC25A28Q96A46 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC25A28Q96A46 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC25A28Q96A46 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC25A28Q96A46 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.72■■□□□ 1.39
SLC25A28Q96A46 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC23.71■■□□□ 1.39
SLC25A28Q96A46 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SLC25A28Q96A46 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.7■■□□□ 1.38
SLC25A28Q96A46 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SLC25A28Q96A46 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC25A28Q96A46 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.69■■□□□ 1.38
SLC25A28Q96A46 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC25A28Q96A46 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SLC25A28Q96A46 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC25A28Q96A46 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.66■■□□□ 1.38
SLC25A28Q96A46 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC25A28Q96A46 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC25A28Q96A46 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC25A28Q96A46 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC25A28Q96A46 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
SLC25A28Q96A46 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC25A28Q96A46 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC25A28Q96A46 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC25A28Q96A46 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC25A28Q96A46 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SLC25A28Q96A46 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC25A28Q96A46 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
SLC25A28Q96A46 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC25A28Q96A46 DYNLL1-208ENST00000550178 581 ntBASIC23.6■■□□□ 1.37
SLC25A28Q96A46 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC25A28Q96A46 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC25A28Q96A46 ABCB10P3-201ENST00000561950 2166 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms