Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
U2AF1L4Q8WU68 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
U2AF1L4Q8WU68 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
U2AF1L4Q8WU68 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.19■■■□□ 2.74
U2AF1L4Q8WU68 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
U2AF1L4Q8WU68 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.17■■■□□ 2.74
U2AF1L4Q8WU68 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
U2AF1L4Q8WU68 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
U2AF1L4Q8WU68 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.16■■■□□ 2.74
U2AF1L4Q8WU68 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.14■■■□□ 2.74
U2AF1L4Q8WU68 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
U2AF1L4Q8WU68 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
U2AF1L4Q8WU68 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
U2AF1L4Q8WU68 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
U2AF1L4Q8WU68 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
U2AF1L4Q8WU68 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.07■■■□□ 2.72
U2AF1L4Q8WU68 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.06■■■□□ 2.72
U2AF1L4Q8WU68 MIR3665-201ENST00000578708 105 ntBASIC32.06■■■□□ 2.72
U2AF1L4Q8WU68 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.05■■■□□ 2.72
U2AF1L4Q8WU68 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.05■■■□□ 2.72
U2AF1L4Q8WU68 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
U2AF1L4Q8WU68 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
U2AF1L4Q8WU68 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.04■■■□□ 2.72
U2AF1L4Q8WU68 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.04■■■□□ 2.72
U2AF1L4Q8WU68 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
U2AF1L4Q8WU68 HLA-V-202ENST00000446817 847 ntBASIC32.02■■■□□ 2.72
U2AF1L4Q8WU68 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
U2AF1L4Q8WU68 AL133380.1-201ENST00000506013 324 ntBASIC32.01■■■□□ 2.71
U2AF1L4Q8WU68 AC145285.7-201ENST00000614819 1539 ntBASIC31.99■■■□□ 2.71
U2AF1L4Q8WU68 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
U2AF1L4Q8WU68 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.97■■■□□ 2.71
U2AF1L4Q8WU68 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
U2AF1L4Q8WU68 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
U2AF1L4Q8WU68 AC087741.3-201ENST00000624270 1347 ntBASIC31.95■■■□□ 2.7
U2AF1L4Q8WU68 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.93■■■□□ 2.7
U2AF1L4Q8WU68 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.92■■■□□ 2.7
U2AF1L4Q8WU68 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
U2AF1L4Q8WU68 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.89■■■□□ 2.7
U2AF1L4Q8WU68 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.89■■■□□ 2.7
U2AF1L4Q8WU68 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.89■■■□□ 2.7
U2AF1L4Q8WU68 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
U2AF1L4Q8WU68 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
U2AF1L4Q8WU68 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
U2AF1L4Q8WU68 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
U2AF1L4Q8WU68 DUX4L28-201ENST00000623687 678 ntBASIC31.86■■■□□ 2.69
U2AF1L4Q8WU68 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.85■■■□□ 2.69
U2AF1L4Q8WU68 AC044849.2-201ENST00000606596 710 ntBASIC31.8■■■□□ 2.68
U2AF1L4Q8WU68 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
U2AF1L4Q8WU68 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
U2AF1L4Q8WU68 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.78■■■□□ 2.68
U2AF1L4Q8WU68 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
U2AF1L4Q8WU68 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
U2AF1L4Q8WU68 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.76■■■□□ 2.67
U2AF1L4Q8WU68 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.76■■■□□ 2.67
U2AF1L4Q8WU68 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.75■■■□□ 2.67
U2AF1L4Q8WU68 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
U2AF1L4Q8WU68 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
U2AF1L4Q8WU68 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
U2AF1L4Q8WU68 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.72■■■□□ 2.67
U2AF1L4Q8WU68 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.72■■■□□ 2.67
U2AF1L4Q8WU68 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
U2AF1L4Q8WU68 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.7■■■□□ 2.66
U2AF1L4Q8WU68 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.68■■■□□ 2.66
U2AF1L4Q8WU68 MIR762-201ENST00000390236 83 ntBASIC31.67■■■□□ 2.66
U2AF1L4Q8WU68 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
U2AF1L4Q8WU68 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.66■■■□□ 2.66
U2AF1L4Q8WU68 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
U2AF1L4Q8WU68 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.66■■■□□ 2.66
U2AF1L4Q8WU68 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
U2AF1L4Q8WU68 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.64■■■□□ 2.66
U2AF1L4Q8WU68 AC005559.1-201ENST00000589661 871 ntBASIC31.64■■■□□ 2.66
U2AF1L4Q8WU68 ZNRF2P2-203ENST00000454624 420 ntBASIC31.62■■■□□ 2.65
U2AF1L4Q8WU68 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
U2AF1L4Q8WU68 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.61■■■□□ 2.65
U2AF1L4Q8WU68 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.61■■■□□ 2.65
U2AF1L4Q8WU68 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.6■■■□□ 2.65
U2AF1L4Q8WU68 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
U2AF1L4Q8WU68 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.58■■■□□ 2.65
U2AF1L4Q8WU68 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
U2AF1L4Q8WU68 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.56■■■□□ 2.64
U2AF1L4Q8WU68 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
U2AF1L4Q8WU68 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.55■■■□□ 2.64
U2AF1L4Q8WU68 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
U2AF1L4Q8WU68 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.52■■■□□ 2.64
U2AF1L4Q8WU68 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
U2AF1L4Q8WU68 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
U2AF1L4Q8WU68 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
U2AF1L4Q8WU68 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
U2AF1L4Q8WU68 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.5■■■□□ 2.63
U2AF1L4Q8WU68 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.5■■■□□ 2.63
U2AF1L4Q8WU68 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
U2AF1L4Q8WU68 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.47■■■□□ 2.63
U2AF1L4Q8WU68 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
U2AF1L4Q8WU68 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
U2AF1L4Q8WU68 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
U2AF1L4Q8WU68 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.43■■■□□ 2.62
U2AF1L4Q8WU68 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
U2AF1L4Q8WU68 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
U2AF1L4Q8WU68 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
U2AF1L4Q8WU68 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms