Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM116Q8NCL8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.86■■□□□ 1.09
TMEM116Q8NCL8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TMEM116Q8NCL8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.85■■□□□ 1.09
TMEM116Q8NCL8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM116Q8NCL8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.82■■□□□ 1.08
TMEM116Q8NCL8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TMEM116Q8NCL8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TMEM116Q8NCL8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM116Q8NCL8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM116Q8NCL8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM116Q8NCL8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM116Q8NCL8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.76■■□□□ 1.07
TMEM116Q8NCL8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.76■■□□□ 1.07
TMEM116Q8NCL8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM116Q8NCL8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM116Q8NCL8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM116Q8NCL8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM116Q8NCL8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM116Q8NCL8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM116Q8NCL8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TMEM116Q8NCL8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM116Q8NCL8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM116Q8NCL8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM116Q8NCL8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TMEM116Q8NCL8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM116Q8NCL8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM116Q8NCL8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM116Q8NCL8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM116Q8NCL8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM116Q8NCL8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TMEM116Q8NCL8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM116Q8NCL8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM116Q8NCL8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM116Q8NCL8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM116Q8NCL8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM116Q8NCL8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
TMEM116Q8NCL8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TMEM116Q8NCL8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
TMEM116Q8NCL8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM116Q8NCL8 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.66■■□□□ 1.06
TMEM116Q8NCL8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM116Q8NCL8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TMEM116Q8NCL8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.65■■□□□ 1.06
TMEM116Q8NCL8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TMEM116Q8NCL8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM116Q8NCL8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM116Q8NCL8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM116Q8NCL8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM116Q8NCL8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM116Q8NCL8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.62■■□□□ 1.05
TMEM116Q8NCL8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM116Q8NCL8 AC120057.4-201ENST00000624722 1615 ntBASIC21.62■■□□□ 1.05
TMEM116Q8NCL8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.61■■□□□ 1.05
TMEM116Q8NCL8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM116Q8NCL8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM116Q8NCL8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM116Q8NCL8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.57■■□□□ 1.04
TMEM116Q8NCL8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM116Q8NCL8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM116Q8NCL8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM116Q8NCL8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM116Q8NCL8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.56■■□□□ 1.04
TMEM116Q8NCL8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM116Q8NCL8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM116Q8NCL8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM116Q8NCL8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM116Q8NCL8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TMEM116Q8NCL8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TMEM116Q8NCL8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM116Q8NCL8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM116Q8NCL8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM116Q8NCL8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TMEM116Q8NCL8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM116Q8NCL8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM116Q8NCL8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM116Q8NCL8 DYNLL1-208ENST00000550178 581 ntBASIC21.49■■□□□ 1.03
TMEM116Q8NCL8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM116Q8NCL8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM116Q8NCL8 AP002365.1-201ENST00000603448 772 ntBASIC21.48■■□□□ 1.03
TMEM116Q8NCL8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM116Q8NCL8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM116Q8NCL8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM116Q8NCL8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM116Q8NCL8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.45■■□□□ 1.02
TMEM116Q8NCL8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM116Q8NCL8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM116Q8NCL8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM116Q8NCL8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM116Q8NCL8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.42■■□□□ 1.02
TMEM116Q8NCL8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM116Q8NCL8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM116Q8NCL8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
TMEM116Q8NCL8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM116Q8NCL8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM116Q8NCL8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM116Q8NCL8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM116Q8NCL8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.37■■□□□ 1.01
TMEM116Q8NCL8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM116Q8NCL8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms