Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.55■■■□□ 2.64
RETREG2Q8NC44 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RETREG2Q8NC44 RPS2P35-201ENST00000443417 897 ntBASIC31.53■■■□□ 2.64
RETREG2Q8NC44 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.53■■■□□ 2.64
RETREG2Q8NC44 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RETREG2Q8NC44 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
RETREG2Q8NC44 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
RETREG2Q8NC44 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
RETREG2Q8NC44 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.51■■■□□ 2.63
RETREG2Q8NC44 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
RETREG2Q8NC44 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RETREG2Q8NC44 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.47■■■□□ 2.63
RETREG2Q8NC44 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RETREG2Q8NC44 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RETREG2Q8NC44 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RETREG2Q8NC44 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RETREG2Q8NC44 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
RETREG2Q8NC44 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RETREG2Q8NC44 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
RETREG2Q8NC44 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RETREG2Q8NC44 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
RETREG2Q8NC44 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RETREG2Q8NC44 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.61
RETREG2Q8NC44 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
RETREG2Q8NC44 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RETREG2Q8NC44 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RETREG2Q8NC44 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RETREG2Q8NC44 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.27■■■□□ 2.6
RETREG2Q8NC44 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RETREG2Q8NC44 CAHM-201ENST00000604200 896 ntBASIC31.25■■■□□ 2.59
RETREG2Q8NC44 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RETREG2Q8NC44 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.24■■■□□ 2.59
RETREG2Q8NC44 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RETREG2Q8NC44 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RETREG2Q8NC44 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.2■■■□□ 2.59
RETREG2Q8NC44 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
RETREG2Q8NC44 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RETREG2Q8NC44 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RETREG2Q8NC44 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
RETREG2Q8NC44 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RETREG2Q8NC44 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.15■■■□□ 2.58
RETREG2Q8NC44 AP006261.1-201ENST00000584783 668 ntBASIC31.12■■■□□ 2.57
RETREG2Q8NC44 AL391121.1-201ENST00000607967 1349 ntBASIC31.12■■■□□ 2.57
RETREG2Q8NC44 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RETREG2Q8NC44 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 AL162393.1-201ENST00000437852 946 ntBASIC31.1■■■□□ 2.57
RETREG2Q8NC44 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RETREG2Q8NC44 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RETREG2Q8NC44 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.08■■■□□ 2.57
RETREG2Q8NC44 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.07■■■□□ 2.56
RETREG2Q8NC44 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RETREG2Q8NC44 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RETREG2Q8NC44 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RETREG2Q8NC44 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RETREG2Q8NC44 AL133380.1-201ENST00000506013 324 ntBASIC31.05■■■□□ 2.56
RETREG2Q8NC44 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RETREG2Q8NC44 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
RETREG2Q8NC44 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.03■■■□□ 2.56
RETREG2Q8NC44 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.02■■■□□ 2.56
RETREG2Q8NC44 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RETREG2Q8NC44 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31■■■□□ 2.55
RETREG2Q8NC44 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RETREG2Q8NC44 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RETREG2Q8NC44 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
RETREG2Q8NC44 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
RETREG2Q8NC44 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
RETREG2Q8NC44 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RETREG2Q8NC44 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.95■■■□□ 2.54
RETREG2Q8NC44 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RETREG2Q8NC44 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.94■■■□□ 2.54
RETREG2Q8NC44 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RETREG2Q8NC44 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
RETREG2Q8NC44 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RETREG2Q8NC44 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
RETREG2Q8NC44 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.91■■■□□ 2.54
RETREG2Q8NC44 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.89■■■□□ 2.54
RETREG2Q8NC44 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RETREG2Q8NC44 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.88■■■□□ 2.53
RETREG2Q8NC44 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RETREG2Q8NC44 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
RETREG2Q8NC44 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RETREG2Q8NC44 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RETREG2Q8NC44 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RETREG2Q8NC44 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RETREG2Q8NC44 MIR3665-201ENST00000578708 105 ntBASIC30.85■■■□□ 2.53
RETREG2Q8NC44 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RETREG2Q8NC44 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
RETREG2Q8NC44 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms