Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CPSF7Q8N684 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CPSF7Q8N684 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CPSF7Q8N684 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.11■■□□□ 1.93
CPSF7Q8N684 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPSF7Q8N684 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CPSF7Q8N684 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CPSF7Q8N684 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.05■■□□□ 1.92
CPSF7Q8N684 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CPSF7Q8N684 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.04■■□□□ 1.92
CPSF7Q8N684 AP002365.1-201ENST00000603448 772 ntBASIC27.04■■□□□ 1.92
CPSF7Q8N684 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CPSF7Q8N684 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CPSF7Q8N684 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CPSF7Q8N684 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CPSF7Q8N684 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CPSF7Q8N684 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CPSF7Q8N684 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CPSF7Q8N684 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27■■□□□ 1.91
CPSF7Q8N684 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.99■■□□□ 1.91
CPSF7Q8N684 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CPSF7Q8N684 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CPSF7Q8N684 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CPSF7Q8N684 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CPSF7Q8N684 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CPSF7Q8N684 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CPSF7Q8N684 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPSF7Q8N684 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.93■■□□□ 1.9
CPSF7Q8N684 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CPSF7Q8N684 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.91■■□□□ 1.9
CPSF7Q8N684 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CPSF7Q8N684 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
CPSF7Q8N684 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
CPSF7Q8N684 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.9■■□□□ 1.9
CPSF7Q8N684 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CPSF7Q8N684 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CPSF7Q8N684 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CPSF7Q8N684 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CPSF7Q8N684 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CPSF7Q8N684 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.86■■□□□ 1.89
CPSF7Q8N684 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.85■■□□□ 1.89
CPSF7Q8N684 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.85■■□□□ 1.89
CPSF7Q8N684 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.84■■□□□ 1.89
CPSF7Q8N684 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.83■■□□□ 1.89
CPSF7Q8N684 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CPSF7Q8N684 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CPSF7Q8N684 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.82■■□□□ 1.88
CPSF7Q8N684 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CPSF7Q8N684 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CPSF7Q8N684 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CPSF7Q8N684 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPSF7Q8N684 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPSF7Q8N684 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CPSF7Q8N684 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CPSF7Q8N684 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.76■■□□□ 1.88
CPSF7Q8N684 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
CPSF7Q8N684 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CPSF7Q8N684 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CPSF7Q8N684 AC120057.4-201ENST00000624722 1615 ntBASIC26.76■■□□□ 1.87
CPSF7Q8N684 ABCB10P1-201ENST00000614297 2181 ntBASIC26.75■■□□□ 1.87
CPSF7Q8N684 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CPSF7Q8N684 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.75■■□□□ 1.87
CPSF7Q8N684 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
CPSF7Q8N684 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CPSF7Q8N684 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CPSF7Q8N684 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.72■■□□□ 1.87
CPSF7Q8N684 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CPSF7Q8N684 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.71■■□□□ 1.87
CPSF7Q8N684 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CPSF7Q8N684 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CPSF7Q8N684 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPSF7Q8N684 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CPSF7Q8N684 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CPSF7Q8N684 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPSF7Q8N684 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.67■■□□□ 1.86
CPSF7Q8N684 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPSF7Q8N684 DYNLL1-208ENST00000550178 581 ntBASIC26.67■■□□□ 1.86
CPSF7Q8N684 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPSF7Q8N684 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPSF7Q8N684 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CPSF7Q8N684 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CPSF7Q8N684 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CPSF7Q8N684 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CPSF7Q8N684 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CPSF7Q8N684 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CPSF7Q8N684 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.63■■□□□ 1.85
CPSF7Q8N684 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CPSF7Q8N684 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.62■■□□□ 1.85
CPSF7Q8N684 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CPSF7Q8N684 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CPSF7Q8N684 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.6■■□□□ 1.85
CPSF7Q8N684 ABCB10P3-201ENST00000561950 2166 ntBASIC26.6■■□□□ 1.85
CPSF7Q8N684 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.58■■□□□ 1.85
CPSF7Q8N684 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.58■■□□□ 1.85
CPSF7Q8N684 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
CPSF7Q8N684 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPSF7Q8N684 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPSF7Q8N684 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPSF7Q8N684 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CPSF7Q8N684 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms