Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ARHGEF39Q8N4T4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.47■■□□□ 1.83
ARHGEF39Q8N4T4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ARHGEF39Q8N4T4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.44■■□□□ 1.82
ARHGEF39Q8N4T4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ARHGEF39Q8N4T4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.44■■□□□ 1.82
ARHGEF39Q8N4T4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ARHGEF39Q8N4T4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.41■■□□□ 1.82
ARHGEF39Q8N4T4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.39■■□□□ 1.82
ARHGEF39Q8N4T4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.37■■□□□ 1.81
ARHGEF39Q8N4T4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ARHGEF39Q8N4T4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
ARHGEF39Q8N4T4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ARHGEF39Q8N4T4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ARHGEF39Q8N4T4 SETD8P1-201ENST00000623146 1180 ntBASIC26.35■■□□□ 1.81
ARHGEF39Q8N4T4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ARHGEF39Q8N4T4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ARHGEF39Q8N4T4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ARHGEF39Q8N4T4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF39Q8N4T4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
ARHGEF39Q8N4T4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ARHGEF39Q8N4T4 AC136428.2-201ENST00000563187 214 ntBASIC26.31■■□□□ 1.8
ARHGEF39Q8N4T4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.31■■□□□ 1.8
ARHGEF39Q8N4T4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ARHGEF39Q8N4T4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ARHGEF39Q8N4T4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.28■■□□□ 1.8
ARHGEF39Q8N4T4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ARHGEF39Q8N4T4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.27■■□□□ 1.8
ARHGEF39Q8N4T4 AL133380.1-201ENST00000506013 324 ntBASIC26.26■■□□□ 1.79
ARHGEF39Q8N4T4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ARHGEF39Q8N4T4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ARHGEF39Q8N4T4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
ARHGEF39Q8N4T4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.24■■□□□ 1.79
ARHGEF39Q8N4T4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.24■■□□□ 1.79
ARHGEF39Q8N4T4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
ARHGEF39Q8N4T4 AC097358.2-201ENST00000607541 1159 ntBASIC26.23■■□□□ 1.79
ARHGEF39Q8N4T4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ARHGEF39Q8N4T4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.22■■□□□ 1.79
ARHGEF39Q8N4T4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ARHGEF39Q8N4T4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ARHGEF39Q8N4T4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ARHGEF39Q8N4T4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
ARHGEF39Q8N4T4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
ARHGEF39Q8N4T4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF39Q8N4T4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
ARHGEF39Q8N4T4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF39Q8N4T4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF39Q8N4T4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.17■■□□□ 1.78
ARHGEF39Q8N4T4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.16■■□□□ 1.78
ARHGEF39Q8N4T4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.16■■□□□ 1.78
ARHGEF39Q8N4T4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.16■■□□□ 1.78
ARHGEF39Q8N4T4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF39Q8N4T4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.15■■□□□ 1.78
ARHGEF39Q8N4T4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF39Q8N4T4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.14■■□□□ 1.78
ARHGEF39Q8N4T4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ARHGEF39Q8N4T4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ARHGEF39Q8N4T4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ARHGEF39Q8N4T4 CAHM-201ENST00000604200 896 ntBASIC26.1■■□□□ 1.77
ARHGEF39Q8N4T4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.1■■□□□ 1.77
ARHGEF39Q8N4T4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.09■■□□□ 1.77
ARHGEF39Q8N4T4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ARHGEF39Q8N4T4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ARHGEF39Q8N4T4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ARHGEF39Q8N4T4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ARHGEF39Q8N4T4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.07■■□□□ 1.76
ARHGEF39Q8N4T4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ARHGEF39Q8N4T4 SUZ12P1-203ENST00000578195 985 ntBASIC26.06■■□□□ 1.76
ARHGEF39Q8N4T4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ARHGEF39Q8N4T4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ARHGEF39Q8N4T4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.04■■□□□ 1.76
ARHGEF39Q8N4T4 AL391121.1-201ENST00000607967 1349 ntBASIC26.01■■□□□ 1.75
ARHGEF39Q8N4T4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF39Q8N4T4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF39Q8N4T4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF39Q8N4T4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
ARHGEF39Q8N4T4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARHGEF39Q8N4T4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.98■■□□□ 1.75
ARHGEF39Q8N4T4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ARHGEF39Q8N4T4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
ARHGEF39Q8N4T4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
ARHGEF39Q8N4T4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ARHGEF39Q8N4T4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ARHGEF39Q8N4T4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ARHGEF39Q8N4T4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ARHGEF39Q8N4T4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
ARHGEF39Q8N4T4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ARHGEF39Q8N4T4 AC120057.4-201ENST00000624722 1615 ntBASIC25.93■■□□□ 1.74
ARHGEF39Q8N4T4 WASH5P-204ENST00000632292 975 ntBASIC25.92■■□□□ 1.74
ARHGEF39Q8N4T4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ARHGEF39Q8N4T4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ARHGEF39Q8N4T4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.91■■□□□ 1.74
ARHGEF39Q8N4T4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ARHGEF39Q8N4T4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
ARHGEF39Q8N4T4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF39Q8N4T4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.89■■□□□ 1.74
ARHGEF39Q8N4T4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ARHGEF39Q8N4T4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF39Q8N4T4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ARHGEF39Q8N4T4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms