Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC34.74■■■■□ 3.15
SMC5Q8IY18 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
SMC5Q8IY18 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
SMC5Q8IY18 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
SMC5Q8IY18 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.73■■■■□ 3.15
SMC5Q8IY18 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
SMC5Q8IY18 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
SMC5Q8IY18 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC34.72■■■■□ 3.15
SMC5Q8IY18 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
SMC5Q8IY18 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.71■■■■□ 3.15
SMC5Q8IY18 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.7■■■■□ 3.15
SMC5Q8IY18 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.69■■■■□ 3.14
SMC5Q8IY18 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
SMC5Q8IY18 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC34.66■■■■□ 3.14
SMC5Q8IY18 MVK-208ENST00000539696 608 ntTSL 5 BASIC34.66■■■■□ 3.14
SMC5Q8IY18 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.66■■■■□ 3.14
SMC5Q8IY18 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC34.65■■■■□ 3.14
SMC5Q8IY18 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SMC5Q8IY18 DYNLL1-208ENST00000550178 581 ntBASIC34.65■■■■□ 3.14
SMC5Q8IY18 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
SMC5Q8IY18 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
SMC5Q8IY18 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
SMC5Q8IY18 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC34.62■■■■□ 3.13
SMC5Q8IY18 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SMC5Q8IY18 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SMC5Q8IY18 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
SMC5Q8IY18 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
SMC5Q8IY18 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.54■■■■□ 3.12
SMC5Q8IY18 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC34.54■■■■□ 3.12
SMC5Q8IY18 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
SMC5Q8IY18 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SMC5Q8IY18 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
SMC5Q8IY18 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
SMC5Q8IY18 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SMC5Q8IY18 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
SMC5Q8IY18 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC34.48■■■■□ 3.11
SMC5Q8IY18 AC120057.4-201ENST00000624722 1615 ntBASIC34.48■■■■□ 3.11
SMC5Q8IY18 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SMC5Q8IY18 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC34.46■■■■□ 3.11
SMC5Q8IY18 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
SMC5Q8IY18 AL031258.1-201ENST00000623562 325 ntBASIC34.46■■■■□ 3.11
SMC5Q8IY18 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
SMC5Q8IY18 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
SMC5Q8IY18 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
SMC5Q8IY18 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SMC5Q8IY18 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
SMC5Q8IY18 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
SMC5Q8IY18 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.41■■■■□ 3.1
SMC5Q8IY18 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.41■■■■□ 3.1
SMC5Q8IY18 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.4■■■■□ 3.1
SMC5Q8IY18 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.39■■■■□ 3.1
SMC5Q8IY18 EBPL-203ENST00000378270 579 ntTSL 2 BASIC34.39■■■■□ 3.1
SMC5Q8IY18 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC34.39■■■■□ 3.1
SMC5Q8IY18 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
SMC5Q8IY18 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.38■■■■□ 3.09
SMC5Q8IY18 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC34.38■■■■□ 3.09
SMC5Q8IY18 AP002365.1-201ENST00000603448 772 ntBASIC34.37■■■■□ 3.09
SMC5Q8IY18 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
SMC5Q8IY18 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
SMC5Q8IY18 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SMC5Q8IY18 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
SMC5Q8IY18 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.3■■■■□ 3.08
SMC5Q8IY18 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SMC5Q8IY18 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
SMC5Q8IY18 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC34.27■■■■□ 3.08
SMC5Q8IY18 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
SMC5Q8IY18 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SMC5Q8IY18 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC34.23■■■■□ 3.07
SMC5Q8IY18 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC34.22■■■■□ 3.07
SMC5Q8IY18 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC34.21■■■■□ 3.07
SMC5Q8IY18 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
SMC5Q8IY18 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC34.2■■■■□ 3.07
SMC5Q8IY18 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
SMC5Q8IY18 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC34.17■■■■□ 3.06
SMC5Q8IY18 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
SMC5Q8IY18 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
SMC5Q8IY18 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
SMC5Q8IY18 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC34.11■■■■□ 3.05
SMC5Q8IY18 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC34.1■■■■□ 3.05
SMC5Q8IY18 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC34.1■■■■□ 3.05
SMC5Q8IY18 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
SMC5Q8IY18 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
SMC5Q8IY18 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
SMC5Q8IY18 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
SMC5Q8IY18 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
SMC5Q8IY18 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC34.05■■■■□ 3.04
SMC5Q8IY18 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
SMC5Q8IY18 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
SMC5Q8IY18 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
SMC5Q8IY18 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
SMC5Q8IY18 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
SMC5Q8IY18 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.02■■■■□ 3.04
SMC5Q8IY18 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC34.01■■■■□ 3.03
SMC5Q8IY18 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
SMC5Q8IY18 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
SMC5Q8IY18 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
SMC5Q8IY18 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.98■■■■□ 3.03
SMC5Q8IY18 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.98■■■■□ 3.03
SMC5Q8IY18 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
SMC5Q8IY18 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.97■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms