Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.35■■□□□ 1.81
LAPTM4BQ86VI4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
LAPTM4BQ86VI4 SETD8P1-201ENST00000623146 1180 ntBASIC26.33■■□□□ 1.81
LAPTM4BQ86VI4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
LAPTM4BQ86VI4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LAPTM4BQ86VI4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LAPTM4BQ86VI4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.31■■□□□ 1.8
LAPTM4BQ86VI4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
LAPTM4BQ86VI4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LAPTM4BQ86VI4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LAPTM4BQ86VI4 AC097358.2-201ENST00000607541 1159 ntBASIC26.27■■□□□ 1.8
LAPTM4BQ86VI4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LAPTM4BQ86VI4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.25■■□□□ 1.79
LAPTM4BQ86VI4 AC136428.2-201ENST00000563187 214 ntBASIC26.24■■□□□ 1.79
LAPTM4BQ86VI4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LAPTM4BQ86VI4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LAPTM4BQ86VI4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.22■■□□□ 1.79
LAPTM4BQ86VI4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LAPTM4BQ86VI4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.21■■□□□ 1.79
LAPTM4BQ86VI4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.2■■□□□ 1.78
LAPTM4BQ86VI4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.19■■□□□ 1.78
LAPTM4BQ86VI4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.18■■□□□ 1.78
LAPTM4BQ86VI4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
LAPTM4BQ86VI4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LAPTM4BQ86VI4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LAPTM4BQ86VI4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LAPTM4BQ86VI4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.15■■□□□ 1.78
LAPTM4BQ86VI4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.14■■□□□ 1.78
LAPTM4BQ86VI4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.13■■□□□ 1.77
LAPTM4BQ86VI4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LAPTM4BQ86VI4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LAPTM4BQ86VI4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.12■■□□□ 1.77
LAPTM4BQ86VI4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.12■■□□□ 1.77
LAPTM4BQ86VI4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LAPTM4BQ86VI4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
LAPTM4BQ86VI4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.11■■□□□ 1.77
LAPTM4BQ86VI4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LAPTM4BQ86VI4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
LAPTM4BQ86VI4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LAPTM4BQ86VI4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.08■■□□□ 1.77
LAPTM4BQ86VI4 AL133380.1-201ENST00000506013 324 ntBASIC26.07■■□□□ 1.76
LAPTM4BQ86VI4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.07■■□□□ 1.76
LAPTM4BQ86VI4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LAPTM4BQ86VI4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LAPTM4BQ86VI4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
LAPTM4BQ86VI4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
LAPTM4BQ86VI4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.05■■□□□ 1.76
LAPTM4BQ86VI4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LAPTM4BQ86VI4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LAPTM4BQ86VI4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
LAPTM4BQ86VI4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.02■■□□□ 1.76
LAPTM4BQ86VI4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.02■■□□□ 1.76
LAPTM4BQ86VI4 SUZ12P1-203ENST00000578195 985 ntBASIC26.02■■□□□ 1.76
LAPTM4BQ86VI4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.02■■□□□ 1.76
LAPTM4BQ86VI4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26■■□□□ 1.75
LAPTM4BQ86VI4 CAHM-201ENST00000604200 896 ntBASIC26■■□□□ 1.75
LAPTM4BQ86VI4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
LAPTM4BQ86VI4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
LAPTM4BQ86VI4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26■■□□□ 1.75
LAPTM4BQ86VI4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LAPTM4BQ86VI4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.99■■□□□ 1.75
LAPTM4BQ86VI4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.96■■□□□ 1.75
LAPTM4BQ86VI4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LAPTM4BQ86VI4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LAPTM4BQ86VI4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
LAPTM4BQ86VI4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.94■■□□□ 1.74
LAPTM4BQ86VI4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
LAPTM4BQ86VI4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LAPTM4BQ86VI4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.93■■□□□ 1.74
LAPTM4BQ86VI4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LAPTM4BQ86VI4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.93■■□□□ 1.74
LAPTM4BQ86VI4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LAPTM4BQ86VI4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
LAPTM4BQ86VI4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.89■■□□□ 1.74
LAPTM4BQ86VI4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.89■■□□□ 1.74
LAPTM4BQ86VI4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
LAPTM4BQ86VI4 AL391121.1-201ENST00000607967 1349 ntBASIC25.88■■□□□ 1.73
LAPTM4BQ86VI4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LAPTM4BQ86VI4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LAPTM4BQ86VI4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.86■■□□□ 1.73
LAPTM4BQ86VI4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LAPTM4BQ86VI4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
LAPTM4BQ86VI4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LAPTM4BQ86VI4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LAPTM4BQ86VI4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LAPTM4BQ86VI4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LAPTM4BQ86VI4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LAPTM4BQ86VI4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LAPTM4BQ86VI4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LAPTM4BQ86VI4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
LAPTM4BQ86VI4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LAPTM4BQ86VI4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LAPTM4BQ86VI4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
LAPTM4BQ86VI4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
LAPTM4BQ86VI4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.78■■□□□ 1.72
LAPTM4BQ86VI4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
LAPTM4BQ86VI4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LAPTM4BQ86VI4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.75■■□□□ 1.71
LAPTM4BQ86VI4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.75■■□□□ 1.71
LAPTM4BQ86VI4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms