Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.13■■□□□ 1.61
HIST3H2AQ7L7L0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.13■■□□□ 1.61
HIST3H2AQ7L7L0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HIST3H2AQ7L7L0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
HIST3H2AQ7L7L0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
HIST3H2AQ7L7L0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
HIST3H2AQ7L7L0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HIST3H2AQ7L7L0 DYNLL1-208ENST00000550178 581 ntBASIC25.1■■□□□ 1.61
HIST3H2AQ7L7L0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
HIST3H2AQ7L7L0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.1■■□□□ 1.61
HIST3H2AQ7L7L0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
HIST3H2AQ7L7L0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HIST3H2AQ7L7L0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
HIST3H2AQ7L7L0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HIST3H2AQ7L7L0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
HIST3H2AQ7L7L0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
HIST3H2AQ7L7L0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
HIST3H2AQ7L7L0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
HIST3H2AQ7L7L0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.04■■□□□ 1.6
HIST3H2AQ7L7L0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.04■■□□□ 1.6
HIST3H2AQ7L7L0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HIST3H2AQ7L7L0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HIST3H2AQ7L7L0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
HIST3H2AQ7L7L0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HIST3H2AQ7L7L0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HIST3H2AQ7L7L0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.02■■□□□ 1.6
HIST3H2AQ7L7L0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.01■■□□□ 1.59
HIST3H2AQ7L7L0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.01■■□□□ 1.59
HIST3H2AQ7L7L0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
HIST3H2AQ7L7L0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
HIST3H2AQ7L7L0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
HIST3H2AQ7L7L0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.99■■□□□ 1.59
HIST3H2AQ7L7L0 AP002365.1-201ENST00000603448 772 ntBASIC24.98■■□□□ 1.59
HIST3H2AQ7L7L0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.97■■□□□ 1.59
HIST3H2AQ7L7L0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
HIST3H2AQ7L7L0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HIST3H2AQ7L7L0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HIST3H2AQ7L7L0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
HIST3H2AQ7L7L0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.94■■□□□ 1.58
HIST3H2AQ7L7L0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HIST3H2AQ7L7L0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.93■■□□□ 1.58
HIST3H2AQ7L7L0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HIST3H2AQ7L7L0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HIST3H2AQ7L7L0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HIST3H2AQ7L7L0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HIST3H2AQ7L7L0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HIST3H2AQ7L7L0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.9■■□□□ 1.58
HIST3H2AQ7L7L0 AL031258.1-201ENST00000623562 325 ntBASIC24.9■■□□□ 1.58
HIST3H2AQ7L7L0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HIST3H2AQ7L7L0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.89■■□□□ 1.58
HIST3H2AQ7L7L0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HIST3H2AQ7L7L0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HIST3H2AQ7L7L0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HIST3H2AQ7L7L0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HIST3H2AQ7L7L0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
HIST3H2AQ7L7L0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.87■■□□□ 1.57
HIST3H2AQ7L7L0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.87■■□□□ 1.57
HIST3H2AQ7L7L0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HIST3H2AQ7L7L0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
HIST3H2AQ7L7L0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HIST3H2AQ7L7L0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
HIST3H2AQ7L7L0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
HIST3H2AQ7L7L0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HIST3H2AQ7L7L0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.83■■□□□ 1.57
HIST3H2AQ7L7L0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HIST3H2AQ7L7L0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.81■■□□□ 1.56
HIST3H2AQ7L7L0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
HIST3H2AQ7L7L0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.81■■□□□ 1.56
HIST3H2AQ7L7L0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.81■■□□□ 1.56
HIST3H2AQ7L7L0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HIST3H2AQ7L7L0 AC120057.4-201ENST00000624722 1615 ntBASIC24.8■■□□□ 1.56
HIST3H2AQ7L7L0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
HIST3H2AQ7L7L0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HIST3H2AQ7L7L0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
HIST3H2AQ7L7L0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HIST3H2AQ7L7L0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.76■■□□□ 1.55
HIST3H2AQ7L7L0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.75■■□□□ 1.55
HIST3H2AQ7L7L0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HIST3H2AQ7L7L0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.74■■□□□ 1.55
HIST3H2AQ7L7L0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HIST3H2AQ7L7L0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.73■■□□□ 1.55
HIST3H2AQ7L7L0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
HIST3H2AQ7L7L0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HIST3H2AQ7L7L0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
HIST3H2AQ7L7L0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
HIST3H2AQ7L7L0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.71■■□□□ 1.55
HIST3H2AQ7L7L0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HIST3H2AQ7L7L0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
HIST3H2AQ7L7L0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.7■■□□□ 1.54
HIST3H2AQ7L7L0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.7■■□□□ 1.54
HIST3H2AQ7L7L0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HIST3H2AQ7L7L0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HIST3H2AQ7L7L0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HIST3H2AQ7L7L0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HIST3H2AQ7L7L0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HIST3H2AQ7L7L0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HIST3H2AQ7L7L0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HIST3H2AQ7L7L0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
HIST3H2AQ7L7L0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HIST3H2AQ7L7L0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms