Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RNF44Q7L0R7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.63■■□□□ 1.85
RNF44Q7L0R7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF44Q7L0R7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF44Q7L0R7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
RNF44Q7L0R7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.58■■□□□ 1.85
RNF44Q7L0R7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.58■■□□□ 1.85
RNF44Q7L0R7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RNF44Q7L0R7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.58■■□□□ 1.85
RNF44Q7L0R7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF44Q7L0R7 SETD8P1-201ENST00000623146 1180 ntBASIC26.54■■□□□ 1.84
RNF44Q7L0R7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF44Q7L0R7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RNF44Q7L0R7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF44Q7L0R7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF44Q7L0R7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF44Q7L0R7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RNF44Q7L0R7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF44Q7L0R7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF44Q7L0R7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.48■■□□□ 1.83
RNF44Q7L0R7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RNF44Q7L0R7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RNF44Q7L0R7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.46■■□□□ 1.83
RNF44Q7L0R7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.45■■□□□ 1.82
RNF44Q7L0R7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF44Q7L0R7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.44■■□□□ 1.82
RNF44Q7L0R7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.43■■□□□ 1.82
RNF44Q7L0R7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RNF44Q7L0R7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF44Q7L0R7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
RNF44Q7L0R7 AC136428.2-201ENST00000563187 214 ntBASIC26.41■■□□□ 1.82
RNF44Q7L0R7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF44Q7L0R7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
RNF44Q7L0R7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF44Q7L0R7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.4■■□□□ 1.82
RNF44Q7L0R7 AL133380.1-201ENST00000506013 324 ntBASIC26.4■■□□□ 1.82
RNF44Q7L0R7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
RNF44Q7L0R7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF44Q7L0R7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF44Q7L0R7 AC097358.2-201ENST00000607541 1159 ntBASIC26.39■■□□□ 1.82
RNF44Q7L0R7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF44Q7L0R7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RNF44Q7L0R7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.37■■□□□ 1.81
RNF44Q7L0R7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.35■■□□□ 1.81
RNF44Q7L0R7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RNF44Q7L0R7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF44Q7L0R7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNF44Q7L0R7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
RNF44Q7L0R7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.32■■□□□ 1.8
RNF44Q7L0R7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.31■■□□□ 1.8
RNF44Q7L0R7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RNF44Q7L0R7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.31■■□□□ 1.8
RNF44Q7L0R7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF44Q7L0R7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.3■■□□□ 1.8
RNF44Q7L0R7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF44Q7L0R7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF44Q7L0R7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF44Q7L0R7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.27■■□□□ 1.8
RNF44Q7L0R7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF44Q7L0R7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.26■■□□□ 1.79
RNF44Q7L0R7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.26■■□□□ 1.79
RNF44Q7L0R7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF44Q7L0R7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF44Q7L0R7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.23■■□□□ 1.79
RNF44Q7L0R7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.23■■□□□ 1.79
RNF44Q7L0R7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF44Q7L0R7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF44Q7L0R7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF44Q7L0R7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
RNF44Q7L0R7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF44Q7L0R7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RNF44Q7L0R7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF44Q7L0R7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF44Q7L0R7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF44Q7L0R7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
RNF44Q7L0R7 CAHM-201ENST00000604200 896 ntBASIC26.18■■□□□ 1.78
RNF44Q7L0R7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.17■■□□□ 1.78
RNF44Q7L0R7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RNF44Q7L0R7 AL391121.1-201ENST00000607967 1349 ntBASIC26.15■■□□□ 1.78
RNF44Q7L0R7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF44Q7L0R7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF44Q7L0R7 SUZ12P1-203ENST00000578195 985 ntBASIC26.14■■□□□ 1.78
RNF44Q7L0R7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RNF44Q7L0R7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF44Q7L0R7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.12■■□□□ 1.77
RNF44Q7L0R7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF44Q7L0R7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF44Q7L0R7 AC120057.4-201ENST00000624722 1615 ntBASIC26.1■■□□□ 1.77
RNF44Q7L0R7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF44Q7L0R7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF44Q7L0R7 WASH5P-204ENST00000632292 975 ntBASIC26.08■■□□□ 1.77
RNF44Q7L0R7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF44Q7L0R7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
RNF44Q7L0R7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF44Q7L0R7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF44Q7L0R7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF44Q7L0R7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.05■■□□□ 1.76
RNF44Q7L0R7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF44Q7L0R7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF44Q7L0R7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms