Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDR1P51861 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CDR1P51861 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.97■■■□□ 2.39
CDR1P51861 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.95■■■□□ 2.39
CDR1P51861 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
CDR1P51861 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CDR1P51861 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.94■■■□□ 2.38
CDR1P51861 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.93■■■□□ 2.38
CDR1P51861 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.93■■■□□ 2.38
CDR1P51861 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDR1P51861 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CDR1P51861 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.91■■■□□ 2.38
CDR1P51861 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.9■■■□□ 2.38
CDR1P51861 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDR1P51861 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDR1P51861 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDR1P51861 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.86■■■□□ 2.37
CDR1P51861 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.85■■■□□ 2.37
CDR1P51861 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.84■■■□□ 2.37
CDR1P51861 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.84■■■□□ 2.37
CDR1P51861 SETD8P1-201ENST00000623146 1180 ntBASIC29.84■■■□□ 2.37
CDR1P51861 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.83■■■□□ 2.37
CDR1P51861 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDR1P51861 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.81■■■□□ 2.36
CDR1P51861 AC097358.2-201ENST00000607541 1159 ntBASIC29.8■■■□□ 2.36
CDR1P51861 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDR1P51861 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDR1P51861 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDR1P51861 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDR1P51861 AC136428.2-201ENST00000563187 214 ntBASIC29.75■■■□□ 2.35
CDR1P51861 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDR1P51861 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CDR1P51861 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.73■■■□□ 2.35
CDR1P51861 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.73■■■□□ 2.35
CDR1P51861 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDR1P51861 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDR1P51861 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDR1P51861 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDR1P51861 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.71■■■□□ 2.35
CDR1P51861 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.71■■■□□ 2.35
CDR1P51861 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.7■■■□□ 2.35
CDR1P51861 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.7■■■□□ 2.35
CDR1P51861 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.69■■■□□ 2.34
CDR1P51861 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.69■■■□□ 2.34
CDR1P51861 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.68■■■□□ 2.34
CDR1P51861 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.67■■■□□ 2.34
CDR1P51861 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.66■■■□□ 2.34
CDR1P51861 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
CDR1P51861 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDR1P51861 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CDR1P51861 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CDR1P51861 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDR1P51861 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDR1P51861 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.64■■■□□ 2.34
CDR1P51861 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.62■■■□□ 2.33
CDR1P51861 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CDR1P51861 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.61■■■□□ 2.33
CDR1P51861 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.59■■■□□ 2.33
CDR1P51861 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.56■■■□□ 2.32
CDR1P51861 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDR1P51861 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDR1P51861 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDR1P51861 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDR1P51861 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.54■■■□□ 2.32
CDR1P51861 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.52■■■□□ 2.32
CDR1P51861 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
CDR1P51861 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.52■■■□□ 2.32
CDR1P51861 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
CDR1P51861 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
CDR1P51861 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CDR1P51861 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CDR1P51861 SUZ12P1-203ENST00000578195 985 ntBASIC29.5■■■□□ 2.31
CDR1P51861 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
CDR1P51861 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDR1P51861 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDR1P51861 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.48■■■□□ 2.31
CDR1P51861 AL133380.1-201ENST00000506013 324 ntBASIC29.46■■■□□ 2.31
CDR1P51861 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
CDR1P51861 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CDR1P51861 CAHM-201ENST00000604200 896 ntBASIC29.45■■■□□ 2.31
CDR1P51861 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.42■■■□□ 2.3
CDR1P51861 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDR1P51861 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.42■■■□□ 2.3
CDR1P51861 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDR1P51861 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CDR1P51861 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDR1P51861 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CDR1P51861 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDR1P51861 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDR1P51861 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
CDR1P51861 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDR1P51861 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDR1P51861 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDR1P51861 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
CDR1P51861 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.35■■■□□ 2.29
CDR1P51861 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.34■■■□□ 2.29
CDR1P51861 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.34■■■□□ 2.29
CDR1P51861 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDR1P51861 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.33■■■□□ 2.29
CDR1P51861 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms