Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
USP11P51784 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
USP11P51784 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP11P51784 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.6■■■□□ 2.65
USP11P51784 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.59■■■□□ 2.65
USP11P51784 RARRES2P7-201ENST00000567349 469 ntBASIC31.59■■■□□ 2.65
USP11P51784 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
USP11P51784 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
USP11P51784 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.58■■■□□ 2.65
USP11P51784 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
USP11P51784 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
USP11P51784 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
USP11P51784 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.54■■■□□ 2.64
USP11P51784 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
USP11P51784 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.53■■■□□ 2.64
USP11P51784 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.53■■■□□ 2.64
USP11P51784 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP11P51784 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
USP11P51784 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
USP11P51784 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.5■■■□□ 2.63
USP11P51784 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.49■■■□□ 2.63
USP11P51784 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
USP11P51784 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
USP11P51784 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
USP11P51784 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
USP11P51784 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
USP11P51784 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.45■■■□□ 2.63
USP11P51784 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP11P51784 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP11P51784 SETD8P1-201ENST00000623146 1180 ntBASIC31.42■■■□□ 2.62
USP11P51784 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
USP11P51784 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.42■■■□□ 2.62
USP11P51784 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP11P51784 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
USP11P51784 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
USP11P51784 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.38■■■□□ 2.61
USP11P51784 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.38■■■□□ 2.61
USP11P51784 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
USP11P51784 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP11P51784 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USP11P51784 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USP11P51784 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP11P51784 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
USP11P51784 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
USP11P51784 AL133380.1-201ENST00000506013 324 ntBASIC31.32■■■□□ 2.6
USP11P51784 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
USP11P51784 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
USP11P51784 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.29■■■□□ 2.6
USP11P51784 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
USP11P51784 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.26■■■□□ 2.6
USP11P51784 AC097358.2-201ENST00000607541 1159 ntBASIC31.26■■■□□ 2.59
USP11P51784 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.25■■■□□ 2.59
USP11P51784 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
USP11P51784 AC136428.2-201ENST00000563187 214 ntBASIC31.25■■■□□ 2.59
USP11P51784 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
USP11P51784 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
USP11P51784 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.23■■■□□ 2.59
USP11P51784 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
USP11P51784 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
USP11P51784 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
USP11P51784 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.2■■■□□ 2.58
USP11P51784 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
USP11P51784 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.19■■■□□ 2.58
USP11P51784 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP11P51784 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP11P51784 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP11P51784 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP11P51784 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP11P51784 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP11P51784 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.13■■■□□ 2.57
USP11P51784 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.13■■■□□ 2.57
USP11P51784 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
USP11P51784 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.12■■■□□ 2.57
USP11P51784 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.12■■■□□ 2.57
USP11P51784 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
USP11P51784 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
USP11P51784 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
USP11P51784 AC120057.4-201ENST00000624722 1615 ntBASIC31.07■■■□□ 2.56
USP11P51784 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
USP11P51784 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.07■■■□□ 2.56
USP11P51784 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP11P51784 CAHM-201ENST00000604200 896 ntBASIC31.05■■■□□ 2.56
USP11P51784 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.04■■■□□ 2.56
USP11P51784 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
USP11P51784 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.02■■■□□ 2.56
USP11P51784 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
USP11P51784 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.01■■■□□ 2.55
USP11P51784 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
USP11P51784 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
USP11P51784 AL391121.1-201ENST00000607967 1349 ntBASIC30.99■■■□□ 2.55
USP11P51784 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
USP11P51784 WASH5P-204ENST00000632292 975 ntBASIC30.99■■■□□ 2.55
USP11P51784 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
USP11P51784 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
USP11P51784 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
USP11P51784 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
USP11P51784 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USP11P51784 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
USP11P51784 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.94■■■□□ 2.54
USP11P51784 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms