Protein–RNA interactions for Protein: P26447

S100A4, Protein S100-A4, humanhuman

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S100A4P26447 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.6■□□□□ 0.89
S100A4P26447 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
S100A4P26447 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
S100A4P26447 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
S100A4P26447 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.59■□□□□ 0.89
S100A4P26447 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
S100A4P26447 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
S100A4P26447 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.57■□□□□ 0.88
S100A4P26447 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
S100A4P26447 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
S100A4P26447 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.56■□□□□ 0.88
S100A4P26447 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.56■□□□□ 0.88
S100A4P26447 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
S100A4P26447 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.55■□□□□ 0.88
S100A4P26447 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
S100A4P26447 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
S100A4P26447 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
S100A4P26447 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
S100A4P26447 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
S100A4P26447 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
S100A4P26447 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
S100A4P26447 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
S100A4P26447 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
S100A4P26447 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
S100A4P26447 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.51■□□□□ 0.87
S100A4P26447 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
S100A4P26447 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
S100A4P26447 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
S100A4P26447 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.49■□□□□ 0.87
S100A4P26447 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
S100A4P26447 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S100A4P26447 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
S100A4P26447 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S100A4P26447 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
S100A4P26447 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
S100A4P26447 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.41■□□□□ 0.86
S100A4P26447 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
S100A4P26447 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
S100A4P26447 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
S100A4P26447 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
S100A4P26447 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.37■□□□□ 0.85
S100A4P26447 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
S100A4P26447 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.36■□□□□ 0.85
S100A4P26447 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
S100A4P26447 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.34■□□□□ 0.85
S100A4P26447 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
S100A4P26447 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.32■□□□□ 0.84
S100A4P26447 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
S100A4P26447 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
S100A4P26447 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
S100A4P26447 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
S100A4P26447 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
S100A4P26447 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
S100A4P26447 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
S100A4P26447 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
S100A4P26447 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.3■□□□□ 0.84
S100A4P26447 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
S100A4P26447 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.29■□□□□ 0.84
S100A4P26447 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
S100A4P26447 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
S100A4P26447 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
S100A4P26447 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
S100A4P26447 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
S100A4P26447 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
S100A4P26447 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
S100A4P26447 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
S100A4P26447 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
S100A4P26447 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.24■□□□□ 0.83
S100A4P26447 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
S100A4P26447 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.24■□□□□ 0.83
S100A4P26447 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.24■□□□□ 0.83
S100A4P26447 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
S100A4P26447 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
S100A4P26447 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.21■□□□□ 0.83
S100A4P26447 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
S100A4P26447 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.19■□□□□ 0.82
S100A4P26447 AC120057.4-201ENST00000624722 1615 ntBASIC20.18■□□□□ 0.82
S100A4P26447 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
S100A4P26447 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.17■□□□□ 0.82
S100A4P26447 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
S100A4P26447 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
S100A4P26447 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
S100A4P26447 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.13■□□□□ 0.81
S100A4P26447 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
S100A4P26447 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
S100A4P26447 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S100A4P26447 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
S100A4P26447 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.12■□□□□ 0.81
S100A4P26447 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S100A4P26447 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.12■□□□□ 0.81
S100A4P26447 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S100A4P26447 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.11■□□□□ 0.81
S100A4P26447 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
S100A4P26447 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
S100A4P26447 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
S100A4P26447 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.1■□□□□ 0.81
S100A4P26447 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
S100A4P26447 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
S100A4P26447 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
S100A4P26447 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms