Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACANP16112 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.76■■□□□ 1.39
ACANP16112 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ACANP16112 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ACANP16112 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
ACANP16112 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
ACANP16112 AC087741.3-201ENST00000624270 1347 ntBASIC23.69■■□□□ 1.38
ACANP16112 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.65■■□□□ 1.38
ACANP16112 AC145285.7-201ENST00000614819 1539 ntBASIC23.65■■□□□ 1.38
ACANP16112 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.65■■□□□ 1.38
ACANP16112 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ACANP16112 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ACANP16112 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.62■■□□□ 1.37
ACANP16112 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
ACANP16112 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.61■■□□□ 1.37
ACANP16112 AC044849.2-201ENST00000606596 710 ntBASIC23.61■■□□□ 1.37
ACANP16112 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
ACANP16112 DUX4L28-201ENST00000623687 678 ntBASIC23.59■■□□□ 1.37
ACANP16112 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
ACANP16112 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ACANP16112 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.55■■□□□ 1.36
ACANP16112 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.55■■□□□ 1.36
ACANP16112 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ACANP16112 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ACANP16112 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.53■■□□□ 1.36
ACANP16112 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
ACANP16112 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
ACANP16112 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.52■■□□□ 1.36
ACANP16112 AL133380.1-201ENST00000506013 324 ntBASIC23.52■■□□□ 1.36
ACANP16112 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.51■■□□□ 1.35
ACANP16112 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.51■■□□□ 1.35
ACANP16112 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ACANP16112 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
ACANP16112 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
ACANP16112 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.49■■□□□ 1.35
ACANP16112 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.49■■□□□ 1.35
ACANP16112 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.49■■□□□ 1.35
ACANP16112 MIR762-201ENST00000390236 83 ntBASIC23.49■■□□□ 1.35
ACANP16112 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ACANP16112 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.48■■□□□ 1.35
ACANP16112 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.48■■□□□ 1.35
ACANP16112 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
ACANP16112 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.47■■□□□ 1.35
ACANP16112 MIR4449-201ENST00000578365 66 ntBASIC23.47■■□□□ 1.35
ACANP16112 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.47■■□□□ 1.35
ACANP16112 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.46■■□□□ 1.35
ACANP16112 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.46■■□□□ 1.35
ACANP16112 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ACANP16112 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.44■■□□□ 1.34
ACANP16112 AC005559.1-201ENST00000589661 871 ntBASIC23.44■■□□□ 1.34
ACANP16112 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ACANP16112 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
ACANP16112 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ACANP16112 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ACANP16112 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.39■■□□□ 1.34
ACANP16112 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ACANP16112 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ACANP16112 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ACANP16112 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
ACANP16112 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.36■■□□□ 1.33
ACANP16112 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.34■■□□□ 1.33
ACANP16112 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ACANP16112 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ACANP16112 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.32■■□□□ 1.32
ACANP16112 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ACANP16112 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.3■■□□□ 1.32
ACANP16112 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.29■■□□□ 1.32
ACANP16112 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ACANP16112 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ACANP16112 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ACANP16112 ZNRF2P2-203ENST00000454624 420 ntBASIC23.28■■□□□ 1.32
ACANP16112 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ACANP16112 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ACANP16112 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ACANP16112 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.25■■□□□ 1.31
ACANP16112 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ACANP16112 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.24■■□□□ 1.31
ACANP16112 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
ACANP16112 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.23■■□□□ 1.31
ACANP16112 HSD17B1P1-201ENST00000590052 955 ntBASIC23.23■■□□□ 1.31
ACANP16112 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.21■■□□□ 1.31
ACANP16112 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
ACANP16112 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ACANP16112 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ACANP16112 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.2■■□□□ 1.3
ACANP16112 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.19■■□□□ 1.3
ACANP16112 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.19■■□□□ 1.3
ACANP16112 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.18■■□□□ 1.3
ACANP16112 MIR639-201ENST00000384974 98 ntBASIC23.18■■□□□ 1.3
ACANP16112 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.18■■□□□ 1.3
ACANP16112 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ACANP16112 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ACANP16112 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.14■■□□□ 1.3
ACANP16112 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ACANP16112 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ACANP16112 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ACANP16112 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ACANP16112 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ACANP16112 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.09■■□□□ 1.29
ACANP16112 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms