Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAB40ALP0C0E4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAB40ALP0C0E4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAB40ALP0C0E4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAB40ALP0C0E4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAB40ALP0C0E4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAB40ALP0C0E4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB40ALP0C0E4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RAB40ALP0C0E4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.3■■□□□ 1.8
RAB40ALP0C0E4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB40ALP0C0E4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
RAB40ALP0C0E4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.28■■□□□ 1.8
RAB40ALP0C0E4 AL133380.1-201ENST00000506013 324 ntBASIC26.28■■□□□ 1.8
RAB40ALP0C0E4 CAHM-201ENST00000604200 896 ntBASIC26.28■■□□□ 1.8
RAB40ALP0C0E4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAB40ALP0C0E4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAB40ALP0C0E4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAB40ALP0C0E4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.25■■□□□ 1.79
RAB40ALP0C0E4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAB40ALP0C0E4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RAB40ALP0C0E4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.24■■□□□ 1.79
RAB40ALP0C0E4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RAB40ALP0C0E4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAB40ALP0C0E4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAB40ALP0C0E4 AL391121.1-201ENST00000607967 1349 ntBASIC26.21■■□□□ 1.79
RAB40ALP0C0E4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.2■■□□□ 1.78
RAB40ALP0C0E4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB40ALP0C0E4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.17■■□□□ 1.78
RAB40ALP0C0E4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RAB40ALP0C0E4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RAB40ALP0C0E4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RAB40ALP0C0E4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
RAB40ALP0C0E4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RAB40ALP0C0E4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RAB40ALP0C0E4 RPS2P35-201ENST00000443417 897 ntBASIC26.12■■□□□ 1.77
RAB40ALP0C0E4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
RAB40ALP0C0E4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RAB40ALP0C0E4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.11■■□□□ 1.77
RAB40ALP0C0E4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RAB40ALP0C0E4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RAB40ALP0C0E4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAB40ALP0C0E4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.07■■□□□ 1.76
RAB40ALP0C0E4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RAB40ALP0C0E4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RAB40ALP0C0E4 AP006261.1-201ENST00000584783 668 ntBASIC26.06■■□□□ 1.76
RAB40ALP0C0E4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.05■■□□□ 1.76
RAB40ALP0C0E4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RAB40ALP0C0E4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.04■■□□□ 1.76
RAB40ALP0C0E4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RAB40ALP0C0E4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RAB40ALP0C0E4 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.99■■□□□ 1.75
RAB40ALP0C0E4 AL162393.1-201ENST00000437852 946 ntBASIC25.98■■□□□ 1.75
RAB40ALP0C0E4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RAB40ALP0C0E4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RAB40ALP0C0E4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.94■■□□□ 1.74
RAB40ALP0C0E4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.92■■□□□ 1.74
RAB40ALP0C0E4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAB40ALP0C0E4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.91■■□□□ 1.74
RAB40ALP0C0E4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.91■■□□□ 1.74
RAB40ALP0C0E4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.91■■□□□ 1.74
RAB40ALP0C0E4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RAB40ALP0C0E4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RAB40ALP0C0E4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RAB40ALP0C0E4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.89■■□□□ 1.74
RAB40ALP0C0E4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.89■■□□□ 1.74
RAB40ALP0C0E4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RAB40ALP0C0E4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RAB40ALP0C0E4 MIR3665-201ENST00000578708 105 ntBASIC25.87■■□□□ 1.73
RAB40ALP0C0E4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.85■■□□□ 1.73
RAB40ALP0C0E4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RAB40ALP0C0E4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RAB40ALP0C0E4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
RAB40ALP0C0E4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RAB40ALP0C0E4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAB40ALP0C0E4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RAB40ALP0C0E4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.83■■□□□ 1.73
RAB40ALP0C0E4 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.83■■□□□ 1.73
RAB40ALP0C0E4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RAB40ALP0C0E4 MIR762-201ENST00000390236 83 ntBASIC25.79■■□□□ 1.72
RAB40ALP0C0E4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RAB40ALP0C0E4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RAB40ALP0C0E4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RAB40ALP0C0E4 WASH5P-204ENST00000632292 975 ntBASIC25.77■■□□□ 1.72
RAB40ALP0C0E4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
RAB40ALP0C0E4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
RAB40ALP0C0E4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RAB40ALP0C0E4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.75■■□□□ 1.71
RAB40ALP0C0E4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.75■■□□□ 1.71
RAB40ALP0C0E4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RAB40ALP0C0E4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RAB40ALP0C0E4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.73■■□□□ 1.71
RAB40ALP0C0E4 DUX4L28-201ENST00000623687 678 ntBASIC25.73■■□□□ 1.71
RAB40ALP0C0E4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RAB40ALP0C0E4 AC087741.3-201ENST00000624270 1347 ntBASIC25.71■■□□□ 1.71
RAB40ALP0C0E4 AC005559.1-201ENST00000589661 871 ntBASIC25.71■■□□□ 1.71
RAB40ALP0C0E4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAB40ALP0C0E4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RAB40ALP0C0E4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.69■■□□□ 1.7
RAB40ALP0C0E4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RAB40ALP0C0E4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms