Protein–RNA interactions for Protein: P08237

PFKM, ATP-dependent 6-phosphofructokinase, muscle type, humanhuman

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFKMP08237 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PFKMP08237 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
PFKMP08237 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.06■■■□□ 2.56
PFKMP08237 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
PFKMP08237 AC145285.7-201ENST00000614819 1539 ntBASIC31.06■■■□□ 2.56
PFKMP08237 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.04■■■□□ 2.56
PFKMP08237 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.04■■■□□ 2.56
PFKMP08237 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PFKMP08237 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.03■■■□□ 2.56
PFKMP08237 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PFKMP08237 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PFKMP08237 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.97■■■□□ 2.55
PFKMP08237 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
PFKMP08237 AL133380.1-201ENST00000506013 324 ntBASIC30.96■■■□□ 2.55
PFKMP08237 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.96■■■□□ 2.55
PFKMP08237 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PFKMP08237 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
PFKMP08237 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.93■■■□□ 2.54
PFKMP08237 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PFKMP08237 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PFKMP08237 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PFKMP08237 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
PFKMP08237 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PFKMP08237 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.86■■■□□ 2.53
PFKMP08237 MIR3665-201ENST00000578708 105 ntBASIC30.85■■■□□ 2.53
PFKMP08237 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PFKMP08237 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PFKMP08237 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.83■■■□□ 2.53
PFKMP08237 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.82■■■□□ 2.52
PFKMP08237 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.82■■■□□ 2.52
PFKMP08237 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PFKMP08237 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.81■■■□□ 2.52
PFKMP08237 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PFKMP08237 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PFKMP08237 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
PFKMP08237 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.77■■■□□ 2.52
PFKMP08237 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
PFKMP08237 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
PFKMP08237 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PFKMP08237 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PFKMP08237 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.74■■■□□ 2.51
PFKMP08237 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PFKMP08237 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
PFKMP08237 ABHD17AP4-201ENST00000411545 909 ntBASIC30.73■■■□□ 2.51
PFKMP08237 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.72■■■□□ 2.51
PFKMP08237 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.72■■■□□ 2.51
PFKMP08237 MIR7108-201ENST00000614319 87 ntBASIC30.72■■■□□ 2.51
PFKMP08237 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PFKMP08237 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.7■■■□□ 2.51
PFKMP08237 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PFKMP08237 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.7■■■□□ 2.51
PFKMP08237 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PFKMP08237 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PFKMP08237 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PFKMP08237 AC087741.3-201ENST00000624270 1347 ntBASIC30.66■■■□□ 2.5
PFKMP08237 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PFKMP08237 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.62■■■□□ 2.49
PFKMP08237 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.6■■■□□ 2.49
PFKMP08237 AC044849.2-201ENST00000606596 710 ntBASIC30.59■■■□□ 2.49
PFKMP08237 DUX4L28-201ENST00000623687 678 ntBASIC30.59■■■□□ 2.49
PFKMP08237 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.58■■■□□ 2.49
PFKMP08237 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.58■■■□□ 2.49
PFKMP08237 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PFKMP08237 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PFKMP08237 MIR762-201ENST00000390236 83 ntBASIC30.53■■■□□ 2.48
PFKMP08237 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PFKMP08237 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.52■■■□□ 2.48
PFKMP08237 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.5■■■□□ 2.47
PFKMP08237 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.5■■■□□ 2.47
PFKMP08237 AC005559.1-201ENST00000589661 871 ntBASIC30.5■■■□□ 2.47
PFKMP08237 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.47■■■□□ 2.47
PFKMP08237 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
PFKMP08237 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.46■■■□□ 2.47
PFKMP08237 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PFKMP08237 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.43■■■□□ 2.46
PFKMP08237 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
PFKMP08237 HLA-V-202ENST00000446817 847 ntBASIC30.41■■■□□ 2.46
PFKMP08237 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.41■■■□□ 2.46
PFKMP08237 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PFKMP08237 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
PFKMP08237 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.4■■■□□ 2.46
PFKMP08237 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.39■■■□□ 2.46
PFKMP08237 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PFKMP08237 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
PFKMP08237 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
PFKMP08237 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.37■■■□□ 2.45
PFKMP08237 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PFKMP08237 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
PFKMP08237 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PFKMP08237 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PFKMP08237 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.35■■■□□ 2.45
PFKMP08237 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PFKMP08237 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.34■■■□□ 2.45
PFKMP08237 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.32■■■□□ 2.44
PFKMP08237 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.32■■■□□ 2.44
PFKMP08237 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PFKMP08237 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
PFKMP08237 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
PFKMP08237 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PFKMP08237 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms